LOC110525697 (rsrc2)


Basic Information

Item Value
gene id LOC110525697
gene name rsrc2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 29769924 ~ 29786928 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606060.2
CGCAAATGATGATAGTCATCCAGGTTATAGCTAGCGAGTAGAAGAGACTGGAAGAACTGGAATAGCACGTAAAGGAGAACTCCAATCTAATTTTAGGGAGTTCCTCACGTGTACCATGACGATTACCTCCTATTTGAGGACTATATCAGCGGACAACAAAGCACGTGGCGCCGATTCGACTGATTTACTACCCTTGATGGGCTCTCTTTACACGGATAAAAGGAAACACATTATGGAATCATCCAAATCGCCCAGAAGCTCCAAACACCACCATTCACAATCGAGGTCACGCTCCAGGGACCGAAAGCGCAAATCAAGTGACAAAAAGCACAGACGAAGTCGGAGCAGGAGCAAAGAGGCACGAAGGAGGGACTCTGAGAAGCCATCAAAATCTCACAGCAAGTCGGATGAGCAGCCGGAGCAGActgagaggggcagggagagactTTCTGCAGAGAATGGGGAGGAGCGACACCGGCGCAAAGACAAGAAGGGGAGGAGCCACTCCAGGTCACTCTCACGGGACAGACGTCATCGCAGCAGAAGTCGGGACAAACGGAGATCGCGGTCCCCgcgggagaagaagaagagggccAGCTCCCGGTCGGGTTCAAAGACCAAACACCGCCACAGGAGCAGGAGCAAAAGCAGGGAGCGGAAAAAGAAGACTGATAAGGTGCGCAGAAAAGAGAAGAGTCGTAGCAGGTCTGTGAGCCCCCCGGCTTTCCGGGGCAGAAACACTGCCATGGACGCTCAGGAGGCGCTGGCCAGAAGGTTGGAAAGGGCAAAGAAACTGCAAGAGCAGAAAGAAAAGGAGATGTTGGGGAAACAGCAGCATCAGGAGGTACCTGCAGTTCCAGCTCCCCTGCTGTCTGACACAGTAGTAGTTGCTGCTGCAGTTGCTACCAACCCTGTCCTCAATGTGGCAGCTCTCCTGGCCTCAGGGACCCAGGTCACGCCCCAGATCGCCATGGCAGCGCAGATGGCAGCCCTACAAGCCAAAACCTTAGCAGAGACTGGCATTGCTGTGCCCAGTTATTACAATCCCTCTGCTGTCAACCCCATGAAGTTTGCAGAGCAGGAGAAGAAAAGGAAGAAGCTCTGGCAGGGAAAGAAGGAAGGGGACAAGTCACAGACAGCTGAGTTGTGGGAGAAGCTGAACTTCGGAAATAAGGACCAAAATGTTAAATTTCGTAAACTGATGGGCATCAAAGGGGAAGAGGAAGGTGGTGAGACCTCAAAGCCACTCAACGACGAAGGCCTGAAGACcctgcagcagcaggaggagatgtTCCATAACCTGGACGTTCAGTATGAGATGGCCAGGTCCCAGACCCACACTCAAAGAGGCATGGGACTAGGCTTCGGCTCTTCATTCTCACGGGGCATGGACACCATCTAATGCCAAACCATGCACTGGCTTGCCCTTGCTTTCTTTCTCATTGGTCTCTCCACTCACAGCTAGCACTCAAGCTTGCATGGATGTTGTTGCATTGGATCTGTCATTTTATTTAGAAACAATCTCACGTCTTTTAAACATTCTCATGTAAATAGATGCTGAGTTTTCCTCAGTGTACATCTTTTCTGAATTATGCAATAGTTTAATGACAGTCATGCTGGCTGGATTTAGATTTGTTTGAGAAATGTGATTGCATATCTgttttttacaaaaaaatgtatatattttggaTTGTTTGAAATGGAACATTATGTAGATCAAGTAAAATTATTCTGTTTACGTTCATTTACCAAGTTTCTTTACAAATTGATCTGAATCCTAATCTCAATATGTAGTGTCATCTTTGTTTCCTTTCTACTGAATGGGAATGTAAAACAGTGGATCATATTACTAAGATGTCTACTAGGCATCTGATGGTTTCATGGAAAGAATGAACAATAAACTTACATATGTTCTTGAAATAAAAGTCCATTTGTGTTGAAG
>XM_021606061.2
CCCCAATATTTGTTATGTATGCGCACGCGCAAATGATGATAGTCATCCAGGTTATAGCTAGCGAGTAGAAGAGACTGGAAGAACTGGAATAGCACGTAAAGGAGAACTCCAATCTAATTTTAGGGAGTTCCTCACGTGTACCATGACGGCACGTGGCGCCGATTCGACTGATTTACTACCCTTGATGGGCTCTCTTTACACGGATAAAAGGAAACACATTATGGAATCATCCAAATCGCCCAGAAGCTCCAAACACCACCATTCACAATCGAGGTCACGCTCCAGGGACCGAAAGCGCAAATCAAGTGACAAAAAGCACAGACGAAGTCGGAGCAGGAGCAAAGAGGCACGAAGGAGGGACTCTGAGAAGCCATCAAAATCTCACAGCAAGTCGGATGAGCAGCCGGAGCAGActgagaggggcagggagagactTTCTGCAGAGAATGGGGAGGAGCGACACCGGCGCAAAGACAAGAAGGGGAGGAGCCACTCCAGGTCACTCTCACGGGACAGACGTCATCGCAGCAGAAGTCGGGACAAACGGAGATCGCGGTCCCCgcgggagaagaagaagagggccAGCTCCCGGTCGGGTTCAAAGACCAAACACCGCCACAGGAGCAGGAGCAAAAGCAGGGAGCGGAAAAAGAAGACTGATAAGGTGCGCAGAAAAGAGAAGAGTCGTAGCAGGTCTGTGAGCCCCCCGGCTTTCCGGGGCAGAAACACTGCCATGGACGCTCAGGAGGCGCTGGCCAGAAGGTTGGAAAGGGCAAAGAAACTGCAAGAGCAGAAAGAAAAGGAGATGTTGGGGAAACAGCAGCATCAGGAGGTACCTGCAGTTCCAGCTCCCCTGCTGTCTGACACAGTAGTAGTTGCTGCTGCAGTTGCTACCAACCCTGTCCTCAATGTGGCAGCTCTCCTGGCCTCAGGGACCCAGGTCACGCCCCAGATCGCCATGGCAGCGCAGATGGCAGCCCTACAAGCCAAAACCTTAGCAGAGACTGGCATTGCTGTGCCCAGTTATTACAATCCCTCTGCTGTCAACCCCATGAAGTTTGCAGAGCAGGAGAAGAAAAGGAAGAAGCTCTGGCAGGGAAAGAAGGAAGGGGACAAGTCACAGACAGCTGAGTTGTGGGAGAAGCTGAACTTCGGAAATAAGGACCAAAATGTTAAATTTCGTAAACTGATGGGCATCAAAGGGGAAGAGGAAGGTGGTGAGACCTCAAAGCCACTCAACGACGAAGGCCTGAAGACcctgcagcagcaggaggagatgtTCCATAACCTGGACGTTCAGTATGAGATGGCCAGGTCCCAGACCCACACTCAAAGAGGCATGGGACTAGGCTTCGGCTCTTCATTCTCACGGGGCATGGACACCATCTAATGCCAAACCATGCACTGGCTTGCCCTTGCTTTCTTTCTCATTGGTCTCTCCACTCACAGCTAGCACTCAAGCTTGCATGGATGTTGTTGCATTGGATCTGTCATTTTATTTAGAAACAATCTCACGTCTTTTAAACATTCTCATGTAAATAGATGCTGAGTTTTCCTCAGTGTACATCTTTTCTGAATTATGCAATAGTTTAATGACAGTCATGCTGGCTGGATTTAGATTTGTTTGAGAAATGTGATTGCATATCTgttttttacaaaaaaatgtatatattttggaTTGTTTGAAATGGAACATTATGTAGATCAAGTAAAATTATTCTGTTTACGTTCATTTACCAAGTTTCTTTACAAATTGATCTGAATCCTAATCTCAATATGTAGTGTCATCTTTGTTTCCTTTCTACTGAATGGGAATGTAAAACAGTGGATCATATTACTAAGATGTCTACTAGGCATCTGATGGTTTCATGGAAAGAATGAACAATAAACTTACATATGTTCTTGAAATAAAAGTCCATTTGTGTTGAAG

Function

symbol description
rsrc2 Orthologous to human RSRC2 (arginine and serine rich coiled-coil 2).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K24595 RSRC2; arginine/serine-rich coiled-coil protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606060.2 False 1942 mRNA 0.47 11 29769924 29786901
XM_021606061.2 True 1930 mRNA 0.48 10 29769924 29786928

Neighbor

gene id symbol gene type direction distance location
LOC110525696 LOC106585281 coding downstream 9552 29754902 ~ 29760372 (-)
LOC110525694 LOC106585282 coding downstream 15521 29706059 ~ 29754403 (-)
LOC110525693 NA coding downstream 116148 29650203 ~ 29654088 (-)
LOC110526522 LOC106585290 coding downstream 173115 29595416 ~ 29596809 (-)
LOC110525685 LOC106585294 coding downstream 194326 29526783 ~ 29575598 (-)
LOC118965073 NA coding upstream 11581 29798141 ~ 29811783 (-)
kmt5ab kmt5a coding upstream 76270 29863198 ~ 29870407 (-)
LOC118964857 NA coding upstream 183139 29970067 ~ 29974882 (-)
LOC110525703 LOC106585270 coding upstream 189230 29976158 ~ 29980778 (-)
LOC110525706 NA coding upstream 318437 30102891 ~ 30141156 (-)
G494556 NA non-coding downstream 74186 29693030 ~ 29695738 (-)
G494546 NA non-coding downstream 89238 29680082 ~ 29680686 (-)
G494544 NA non-coding downstream 91807 29677502 ~ 29678117 (-)
G494540 LOC106585286 non-coding downstream 95699 29673676 ~ 29674225 (-)
G494537 NA non-coding downstream 102387 29667282 ~ 29667537 (-)
G494621 NA non-coding upstream 55855 29842783 ~ 29848905 (-)
G494624 NA non-coding upstream 63401 29850329 ~ 29850535 (-)
G494645 NA non-coding upstream 113782 29900710 ~ 29925721 (-)
G494691 NA non-coding upstream 157932 29944860 ~ 29945081 (-)
G494542 NA other downstream 94351 29675323 ~ 29675573 (-)
LOC110525684 LOC106585295 other downstream 266533 29502192 ~ 29520980 (-)
LOC110525681 hectd4 other downstream 286578 29411204 ~ 29483533 (-)
G494389 LOC106585296 other downstream 354610 29411215 ~ 29415314 (-)
LOC110525655 LOC106585601 other downstream 1934622 27827231 ~ 27885634 (-)
LOC110525714 LOC106585251 other upstream 739758 30526034 ~ 30527686 (-)
G495554 NA other upstream 758474 30545402 ~ 30549450 (-)
G495560 NA other upstream 788190 30575118 ~ 30575573 (-)
G496772 NA other upstream 1874465 31661393 ~ 31661618 (-)
G496777 NA other upstream 1884050 31670978 ~ 31671927 (-)

Expression


Co-expression Network