kmt5ab (kmt5a)


Basic Information

Item Value
gene id kmt5ab
gene name kmt5a
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 29863198 ~ 29870407 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021606065.2
TTTAAATAGTTGTTATTGTGGGCACGGTGCGTGGTGGTGACTTGGTTAGTCGGTTTCTGGTTATGCGTTTGTTTGCCAGTGTAACGTAACGAGGAACACGCGAACATTGCAAAAACTTATAACGTAAATTCGTGCATATACTGTCTAGTTTTTGTAGAGTTGAAATGGCGAAAGGGAAGAAAAAAATGCAGACCACCTACAAGAGACCCGAGGGAACCCTTCAGCCCAAACAAATCGAAAAGGAGACAAAGGAAAATAAACCAGAATTTAATGGGGATGCAGGTAATGGTCAGACCACTTTACCAAGTTTGTGGAGTCCCAGCAAACCCAAATCTCCTCTGTGCAACAACTCAAGTTCTCTCAGCCAAGAGGAAAATGTTCCTGAGAAATTGACTCCACAAACTGAGAAATCAACGCAAGGGAAAGTGAGACCGAATCAAGTTAACTCTCAAGCTGGTGTGTCTCGGCAAGAGGAGAATAAAGCGAAGACCCGCTTGGCTCCTCGAATCAGAGGAACAACTACCTTGAAGGGCGAGGTGGATCCAAAATCGCACCCCAATCCAGGGCTTGCGCAAGATGTCCCCATGCCCAAATCTAAGAGGAGGGCTAGTCAAAAAGCCAAAAAAGCACAAGGCAGTGCTGCCCAAAACAGGAAGGTCACAGATTATTATCCGATTAGACGGAGTTCCAGAAAAAGCAAAGCTGAATTGAAGAACGAAGAACAACGACAGCTTGATGACCTGATAAAACATGGAGTTGAAGAAGGACTGCAGGTAAAACATatagaagggaagggaagaggagtgTTTGCTGTCAGATGTTTCAAGAAGGGTCAGTTTGTAATTGAGTATCACGGTGACTTGTTGCATCTGACTGATGCCAAGAAGAGAGAGGCTCTGTATGCCCAAGACCCTGGGACTGGCTGCTACATGTACTATTTTCACTATCTCAGCAAAACCTACTGTGTTGATGCTACAAAAGAATCAACTCGTCTGGGAAGGCTGCTAAACCACAGTAAAAATGGCAACTGCCAGACCAAGCTCCATGACATGGATGGAATACCTCATCTCATACTGGTGGCTTCAAGGGACATTGAGGCAGAGGAAGAACTGGTTTATGACTACGGTGACCGTAGCAAGGAATCAATATGTGCTCACCCATGGCTCAAATACTGATGTTCCACCAGAGTATTCTCTCAAGAGAATGACTAGGTGCAGTCATTTCTTCAAAAAGAGAACCTgttctctttttgtttttttaaaaatcCATTCCATTGGTCCTAAGGTGCAAACTGCTTTCCGGTGAGACAAATTAAGTGTGCCTGTTTGGGCAAAACGGTGGCAGTATGAACAAGATGGAAGACAACCTTTTAAGATGGCACATGGGTTAAATTTGTTTTTAAAACTATCAATTTATTGCTGGATTTGGATGGAGTTTTTATACATATTAAGGCCAGTGTGTCCATGATGTGTGAAATATATTTAACATACTAGCTATTGTTTTTAGGTTGCTTTTATATAAGTGATTAATTTATCAAGCTATGTATGGTTCTAGTTGACGCAACAATATGTTGCATAGGAACGTCAATGCTCTCCTGGCTTCGGGGAGAACAGCTTATACTTGATTTGAAAATGTAGCTTTTGTTGCAATGGGTGAAACATCCAAATGAATTTTGAATAAAATGTAAGTTGCTCTTTTTGAACAAATGAACTGTGTACATAGACAAATCTTTTCATAAAT
>XM_021606064.2
GTGGGCACGGTGCGTGGTGGTGACTTGGTTAGTCGGTTTCTGGTTATGCGTTTGTTTGCCAGTGTAACGTAACGAGGAACACGCGAACATTGCAAAAACTTATAACGTAAATTCGTGCATATACTGTCTAGTTTTTGTAGAGTTGAAATGGCGAAAGacatgACTGCCTTCAAAGGGAAGAAAAAAATGCAGACCACCTACAAGAGACCCGAGGGAACCCTTCAGCCCAAACAAATCGAAAAGGAGACAAAGGAAAATAAACCAGAATTTAATGGGGATGCAGGTAATGGTCAGACCACTTTACCAAGTTTGTGGAGTCCCAGCAAACCCAAATCTCCTCTGTGCAACAACTCAAGTTCTCTCAGCCAAGAGGAAAATGTTCCTGAGAAATTGACTCCACAAACTGAGAAATCAACGCAAGGGAAAGTGAGACCGAATCAAGTTAACTCTCAAGCTGGTGTGTCTCGGCAAGAGGAGAATAAAGCGAAGACCCGCTTGGCTCCTCGAATCAGAGGAACAACTACCTTGAAGGGCGAGGTGGATCCAAAATCGCACCCCAATCCAGGGCTTGCGCAAGATGTCCCCATGCCCAAATCTAAGAGGAGGGCTAGTCAAAAAGCCAAAAAAGCACAAGGCAGTGCTGCCCAAAACAGGAAGGTCACAGATTATTATCCGATTAGACGGAGTTCCAGAAAAAGCAAAGCTGAATTGAAGAACGAAGAACAACGACAGCTTGATGACCTGATAAAACATGGAGTTGAAGAAGGACTGCAGGTAAAACATatagaagggaagggaagaggagtgTTTGCTGTCAGATGTTTCAAGAAGGGTCAGTTTGTAATTGAGTATCACGGTGACTTGTTGCATCTGACTGATGCCAAGAAGAGAGAGGCTCTGTATGCCCAAGACCCTGGGACTGGCTGCTACATGTACTATTTTCACTATCTCAGCAAAACCTACTGTGTTGATGCTACAAAAGAATCAACTCGTCTGGGAAGGCTGCTAAACCACAGTAAAAATGGCAACTGCCAGACCAAGCTCCATGACATGGATGGAATACCTCATCTCATACTGGTGGCTTCAAGGGACATTGAGGCAGAGGAAGAACTGGTTTATGACTACGGTGACCGTAGCAAGGAATCAATATGTGCTCACCCATGGCTCAAATACTGATGTTCCACCAGAGTATTCTCTCAAGAGAATGACTAGGTGCAGTCATTTCTTCAAAAAGAGAACCTgttctctttttgtttttttaaaaatcCATTCCATTGGTCCTAAGGTGCAAACTGCTTTCCGGTGAGACAAATTAAGTGTGCCTGTTTGGGCAAAACGGTGGCAGTATGAACAAGATGGAAGACAACCTTTTAAGATGGCACATGGGTTAAATTTGTTTTTAAAACTATCAATTTATTGCTGGATTTGGATGGAGTTTTTATACATATTAAGGCCAGTGTGTCCATGATGTGTGAAATATATTTAACATACTAGCTATTGTTTTTAGGTTGCTTTTATATAAGTGATTAATTTATCAAGCTATGTATGGTTCTAGTTGACGCAACAATATGTTGCATAGGAACGTCAATGCTCTCCTGGCTTCGGGGAGAACAGCTTATACTTGATTTGAAAATGTAGCTTTTGTTGCAATGGGTGAAACATCCAAATGAATTTTGAATAAAATGTAAGTTGCTCTTTTTGAACAAATGAA

Function

symbol description
kmt5a Enables histone-lysine N-methyltransferase activity; p53 binding activity; and transcription corepressor activity. Involved in negative regulation of transcription by RNA polymerase II; peptidyl-lysine monomethylation; and regulation of DNA damage response, signal transduction by p53 class mediator. Located in cytosol and nucleoplasm.

NR:

description
N-lysine methyltransferase KMT5A-like isoform X1

GO: NA

KEGG:

id description
K11428 SETD8; [histone H4]-lysine20 N-methyltransferase SETD8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021606065.2 False 1740 mRNA 0.42 8 29863198 29870407
XM_021606064.2 True 1711 mRNA 0.42 8 29863228 29870390

Neighbor

gene id symbol gene type direction distance location
LOC118965073 NA coding downstream 51415 29798141 ~ 29811783 (-)
LOC110525697 rsrc2 coding downstream 76270 29769924 ~ 29786928 (-)
LOC110525696 LOC106585281 coding downstream 102826 29754902 ~ 29760372 (-)
LOC110525694 LOC106585282 coding downstream 108795 29706059 ~ 29754403 (-)
LOC110525693 NA coding downstream 209422 29650203 ~ 29654088 (-)
LOC118964857 NA coding upstream 99660 29970067 ~ 29974882 (-)
LOC110525703 LOC106585270 coding upstream 105751 29976158 ~ 29980778 (-)
LOC110525706 NA coding upstream 234958 30102891 ~ 30141156 (-)
LOC110525709 LOC106585264 coding upstream 319165 30189572 ~ 30191815 (-)
sftpbb LOC106585263 coding upstream 329187 30199594 ~ 30209590 (-)
G494624 NA non-coding downstream 12663 29850329 ~ 29850535 (-)
G494621 NA non-coding downstream 14293 29842783 ~ 29848905 (-)
G494556 NA non-coding downstream 167460 29693030 ~ 29695738 (-)
G494546 NA non-coding downstream 182512 29680082 ~ 29680686 (-)
G494645 NA non-coding upstream 30303 29900710 ~ 29925721 (-)
G494691 NA non-coding upstream 74453 29944860 ~ 29945081 (-)
G494692 NA non-coding upstream 75248 29945655 ~ 29945863 (-)
G494693 NA non-coding upstream 75755 29946162 ~ 29946429 (-)
G494694 NA non-coding upstream 77564 29947971 ~ 29948244 (-)
G494542 NA other downstream 187625 29675323 ~ 29675573 (-)
LOC110525684 LOC106585295 other downstream 359807 29502192 ~ 29520980 (-)
LOC110525681 hectd4 other downstream 379852 29411204 ~ 29483533 (-)
G494389 LOC106585296 other downstream 447884 29411215 ~ 29415314 (-)
LOC110525655 LOC106585601 other downstream 2027896 27827231 ~ 27885634 (-)
LOC110525714 LOC106585251 other upstream 656279 30526034 ~ 30527686 (-)
G495554 NA other upstream 674995 30545402 ~ 30549450 (-)
G495560 NA other upstream 704711 30575118 ~ 30575573 (-)
G496772 NA other upstream 1790986 31661393 ~ 31661618 (-)
G496777 NA other upstream 1800571 31670978 ~ 31671927 (-)

Expression


Co-expression Network