LOC118936268 (ublp)


Basic Information

Item Value
gene id LOC118936268
gene name ublp
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 31640221 ~ 31641551 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036979883.1
CGGGGCAGATCAGATGTTATATACATAGACTGCTCAGATGTACACTGACAGAACTATCACTATCTTTCATCGGATAAGTTTCAATTGTCAGCATACGGATTTACTAACAGTATTTCTTAAAACAAACTTGCAAGACTTCACAACAACAGCTTCTCAACAATATCTACTGAACATATATCTATCATGGAACTCACTATAACGCTTTTGAACGGGAACTCACTTCCCCTGACAGTTCCGCCACACACCACCGTGGGGTCTCTCAAGAGTTTGATTCAACAACACTTTGAAGTGGCCACAACAAAGCAGAGGCTGTTAGGCGTCAATGGGAACAACATCAGTCTCAGCGATGATTCAAAAACTTTGAGCGACTATGGCCTGCATTCAGGATCTAAAGTGATGGTGCTGATTACGGAGCCCGCTCCTATCCAGGTGTTCCTGAAAAACGAAAAGggccagacacacacatatgATGTGGTGCCTGGTGAGACTGTAACCCAGTTCAAAGCCAAGGTACAAAACAAGGAGGCAGTCCCTGCCAACCAACAGAGGCTGATTCATGAGGGTAGGCAGCTCGAGGATGGCCAgaagctggagaactacaacatCAGAAATCAAAGCACCATCTATCTGACGCTCCGTCTAAGGGGAGGCTGAAGAAACCCAGTATCGACCTGAAACCACCTGTCACATGAAGCCCTTAACTTATTATGCATTCCATGTCTATAGAGAAAAAGCAATCAATCTTGAACAAAAATGTGAATTGTTCTACATTTGTATTCAATTGTAAACTTTAAATTAAGCATGGCTGATATAGGCGTATATTAATGAGATTGTTATCAAGTAATAAACATGTATAAAACAAAAACTGTC

Function

NR:

description
ubiquitin-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036979883.1 True 870 mRNA 0.42 2 31640221 31641551

Neighbor

gene id symbol gene type direction distance location
ublp ublp coding downstream 4385 31634776 ~ 31635836 (-)
LOC110525743 LOC106584993 coding downstream 9024 31616647 ~ 31631197 (-)
ssh1a LOC106584991 coding downstream 32462 31545143 ~ 31607759 (-)
LOC110525740 LOC106584990 coding downstream 100431 31465833 ~ 31539790 (-)
tmem119a LOC106584989 coding downstream 175621 31458042 ~ 31464600 (-)
gatc gatc coding upstream 10585 31652136 ~ 31656299 (-)
LOC110525757 LOC106585001 coding upstream 94303 31735854 ~ 31758504 (-)
LOC110525759 LOC106585003 coding upstream 159418 31800969 ~ 31824346 (-)
LOC118964859 NA coding upstream 163289 31804840 ~ 31806652 (-)
LOC110525762 LOC106585005 coding upstream 187179 31828730 ~ 31857288 (-)
G496652 NA non-coding downstream 215055 31424921 ~ 31425166 (-)
G496650 NA non-coding downstream 216315 31423689 ~ 31423906 (-)
G496640 NA non-coding downstream 231106 31400634 ~ 31409115 (-)
G496624 NA non-coding downstream 269734 31370010 ~ 31370487 (-)
G496623 NA non-coding downstream 273462 31366522 ~ 31366759 (-)
G496771 NA non-coding upstream 17929 31659480 ~ 31659947 (-)
G496775 NA non-coding upstream 26482 31668033 ~ 31668357 (-)
G496776 NA non-coding upstream 27703 31669254 ~ 31669636 (-)
G496789 NA non-coding upstream 63113 31704664 ~ 31705045 (-)
G496801 NA non-coding upstream 117596 31759147 ~ 31759455 (-)
G495560 NA other downstream 1064648 30575118 ~ 30575573 (-)
G495554 NA other downstream 1090771 30545402 ~ 30549450 (-)
LOC110525714 LOC106585251 other downstream 1112675 30526034 ~ 30527686 (-)
G494542 NA other downstream 1964648 29675323 ~ 29675573 (-)
LOC110525684 LOC106585295 other downstream 2136830 29502192 ~ 29520980 (-)
G496772 NA other upstream 19842 31661393 ~ 31661618 (-)
G496777 NA other upstream 29427 31670978 ~ 31671927 (-)
G496851 NA other upstream 201912 31843463 ~ 31892649 (-)
LOC110525784 LOC106585031 other upstream 1038491 32680037 ~ 32682899 (-)
G498484 rpl6 other upstream 1685956 33327507 ~ 33330504 (-)

Expression


Co-expression Network