Gene
RNA
| Item | Value |
|---|---|
| gene id | G475252 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 12610468 ~ 12610740 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU540319 | True | 251 | lncRNA | 0.48 | 2 | 12610468 | 12610740 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525279 | LOC106585809 | coding | downstream | 55108 | 12310179 ~ 12555360 (-) |
| gkap1 | gkap1 | coding | downstream | 338912 | 12258615 ~ 12271556 (-) |
| LOC110525275 | LOC106585859 | coding | downstream | 352605 | 12250481 ~ 12257863 (-) |
| frmd3 | frmd3 | coding | downstream | 366396 | 12164567 ~ 12244072 (-) |
| LOC110525271 | LOC106585862 | coding | downstream | 452867 | 12139618 ~ 12157601 (-) |
| smn1 | LOC106585806 | coding | upstream | 101552 | 12712292 ~ 12715896 (-) |
| si:dkey-40c11.2 | LOC106585805 | coding | upstream | 111013 | 12721753 ~ 12770314 (-) |
| rhobtb4 | LOC106585803 | coding | upstream | 181930 | 12792670 ~ 12852646 (-) |
| wdr54 | wdr54 | coding | upstream | 267675 | 12878415 ~ 12882594 (-) |
| LOC110525294 | LOC106585797 | coding | upstream | 399542 | 13010282 ~ 13023180 (-) |
| G475245 | NA | non-coding | downstream | 9780 | 12599980 ~ 12600688 (-) |
| G474830 | NA | non-coding | downstream | 131772 | 12478455 ~ 12478696 (-) |
| G474814 | NA | non-coding | downstream | 164320 | 12445753 ~ 12446148 (-) |
| G474807 | NA | non-coding | downstream | 178425 | 12431250 ~ 12432043 (-) |
| G474793 | NA | non-coding | downstream | 216038 | 12393453 ~ 12394430 (-) |
| G475359 | NA | non-coding | upstream | 199137 | 12809877 ~ 12810217 (-) |
| G475375 | NA | non-coding | upstream | 250926 | 12861666 ~ 12871277 (-) |
| G475390 | nol6 | non-coding | upstream | 299212 | 12909952 ~ 12916735 (-) |
| G475509 | NA | non-coding | upstream | 518245 | 13128985 ~ 13160156 (-) |
| G475522 | NA | non-coding | upstream | 551251 | 13161991 ~ 13162259 (-) |
| G474614 | NA | other | downstream | 580858 | 12029159 ~ 12029610 (-) |
| LOC110525267 | LOC106585853 | other | downstream | 653931 | 11955217 ~ 11979397 (-) |
| G474030 | NA | other | downstream | 867710 | 11742202 ~ 11742758 (-) |
| G473930 | NA | other | downstream | 1008471 | 11601515 ~ 11601997 (-) |
| G475413 | NA | other | upstream | 341512 | 12952252 ~ 12954051 (-) |
| LOC110525296 | arrdc3 | other | upstream | 418645 | 13026299 ~ 13046348 (-) |
| G475573 | NA | other | upstream | 586575 | 13197315 ~ 13198012 (-) |
| fam172a | LOC106585793 | other | upstream | 1420675 | 13758198 ~ 14087746 (-) |
| G477528 | LOC106585763 | other | upstream | 2343353 | 14954093 ~ 14956050 (-) |
