G484843



Basic Information


Item Value
gene id G484843
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 21358906 ~ 21359208 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU551057
cctcgacacaatcctgtctctgagctctacaatcaattccttcaacctcatggcttggtttttgctctgacatacactgtcaactgtgggaccttatatagacaggcatgtgcctttccaaatcatgtccaatcaatttaatttaccaaaaggtggactccaatcaagttgttttttatacatttgcaaacatttctaaaaaactgttttcactgtgtcattatggggtattgtgtgtaaattgatgaggaaaacattaattgaatccattttagaataaggctgtaacgtagcaaaatgtgg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU551057 True 303 lncRNA 0.37 1 21358906 21359208

Neighbor


gene id symbol gene type direction distance location
inpp5e LOC106585421 coding downstream 19679 21332767 ~ 21339227 (-)
LOC110513712 LOC106585417 coding downstream 66724 21271935 ~ 21292182 (-)
LOC110525464 LOC106585416 coding downstream 169610 21182658 ~ 21189296 (-)
LOC110525463 LOC106585415 coding downstream 182844 21163810 ~ 21176062 (-)
LOC110525461 LOC106580020 coding downstream 199407 21148940 ~ 21159499 (-)
man1b1b LOC106585427 coding upstream 96190 21455398 ~ 21463967 (-)
si:dkey-61l1.4 LOC106585426 coding upstream 105020 21464228 ~ 21493923 (-)
cacna1ba LOC106585428 coding upstream 140096 21499304 ~ 21689141 (-)
ehmt1a LOC106585429 coding upstream 331903 21691111 ~ 21701749 (-)
LOC110525475 LOC106585430 coding upstream 359207 21718415 ~ 21732524 (-)
G484838 NA non-coding downstream 6309 21352225 ~ 21352597 (-)
G484834 NA non-coding downstream 11047 21347632 ~ 21347859 (-)
G484832 NA non-coding downstream 12425 21345369 ~ 21346481 (-)
G484818 NA non-coding downstream 46208 21312483 ~ 21312698 (-)
G484816 NA non-coding downstream 48469 21310133 ~ 21310437 (-)
G484844 NA non-coding upstream 932 21360140 ~ 21360490 (-)
G484862 NA non-coding upstream 24981 21384189 ~ 21384461 (-)
G484863 NA non-coding upstream 27588 21386796 ~ 21387177 (-)
G484888 NA non-coding upstream 62004 21421212 ~ 21540419 (-)
G484904 NA non-coding upstream 92125 21451333 ~ 21454139 (-)
G484807 LOC106585304 other downstream 60733 21296580 ~ 21298173 (-)
LOC110525458 LOC106585411 other downstream 237839 21115008 ~ 21121728 (-)
G484409 NA other downstream 349824 21007016 ~ 21009082 (-)
G484232 NA other downstream 750170 20588262 ~ 20608736 (-)
LOC110525433 ccng2 other downstream 773259 20584162 ~ 20591588 (-)
G484895 LOC106585423 other upstream 72722 21431930 ~ 21434719 (-)
G485279 NA other upstream 474340 21833548 ~ 21834360 (-)
G485864 NA other upstream 901426 22260634 ~ 22263353 (-)
G485877 NA other upstream 921518 22280726 ~ 22281026 (-)
G486716 NA other upstream 1478445 22837653 ~ 22840566 (-)

Expression



Co-expression Network