Gene
RNA
| Item | Value |
|---|---|
| gene id | G485878 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 22281670 ~ 22281894 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU552200 | True | 225 | lncRNA | 0.40 | 1 | 22281670 | 22281894 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nr5a1a | LOC106585443 | coding | downstream | 50268 | 22215815 ~ 22231402 (-) |
| tubb2b | tubb2b | coding | downstream | 386862 | 21892070 ~ 21894808 (-) |
| LOC110525119 | LOC106585327 | coding | downstream | 502508 | 21775601 ~ 21779162 (-) |
| LOC110525478 | LOC106585434 | coding | downstream | 517547 | 21745476 ~ 21764123 (-) |
| LOC110525477 | LOC106585431 | coding | downstream | 541339 | 21738368 ~ 21740331 (-) |
| LOC110525492 | rpl35 | coding | upstream | 156992 | 22438886 ~ 22441136 (-) |
| LOC110525493 | LOC106585445 | coding | upstream | 159350 | 22441244 ~ 22457748 (-) |
| LOC110525495 | LOC102784428 | coding | upstream | 178875 | 22460769 ~ 22464361 (-) |
| LOC110525498 | shlb2 | coding | upstream | 268320 | 22550214 ~ 22572561 (-) |
| LOC110525497 | LOC106585448 | coding | upstream | 290892 | 22572786 ~ 22579398 (-) |
| G485875 | NA | non-coding | downstream | 3028 | 22278376 ~ 22278642 (-) |
| nr6a1a | LOC106585444 | non-coding | downstream | 16442 | 22264623 ~ 22378999 (-) |
| G485868 | NA | non-coding | downstream | 18009 | 22263440 ~ 22263661 (-) |
| G485700 | NA | non-coding | downstream | 32945 | 22248404 ~ 22248725 (-) |
| G485690 | NA | non-coding | downstream | 40269 | 22241199 ~ 22241401 (-) |
| G485883 | NA | non-coding | upstream | 7686 | 22289580 ~ 22289871 (-) |
| G485904 | NA | non-coding | upstream | 42867 | 22324761 ~ 22325139 (-) |
| G485905 | NA | non-coding | upstream | 43630 | 22325524 ~ 22325750 (-) |
| G485908 | NA | non-coding | upstream | 48894 | 22330788 ~ 22331063 (-) |
| G485913 | NA | non-coding | upstream | 51863 | 22333757 ~ 22334019 (-) |
| G485877 | NA | other | downstream | 644 | 22280726 ~ 22281026 (-) |
| G485864 | NA | other | downstream | 18317 | 22260634 ~ 22263353 (-) |
| G485279 | NA | other | downstream | 447310 | 21833548 ~ 21834360 (-) |
| G484895 | LOC106585423 | other | downstream | 846951 | 21431930 ~ 21434719 (-) |
| G484807 | LOC106585304 | other | downstream | 983497 | 21296580 ~ 21298173 (-) |
| G486716 | NA | other | upstream | 555759 | 22837653 ~ 22840566 (-) |
| G486953 | NA | other | upstream | 969392 | 23251286 ~ 23258106 (-) |
| G487022 | bicdl1 | other | upstream | 1103640 | 23385534 ~ 23385907 (-) |
| G487016 | NA | other | upstream | 1108123 | 23390017 ~ 23392062 (-) |
| LOC110525180 | hps4 | other | upstream | 1301142 | 23582127 ~ 23587892 (-) |
