Gene
RNA
| Item | Value |
|---|---|
| gene id | G486623 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 22636754 ~ 22636967 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU553065 | True | 214 | lncRNA | 0.35 | 1 | 22636754 | 22636967 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525501 | LOC106585453 | coding | downstream | 363 | 22627955 ~ 22636391 (-) |
| LOC110525500 | LOC106585450 | coding | downstream | 19188 | 22593509 ~ 22617566 (-) |
| LOC110525497 | LOC106585448 | coding | downstream | 57356 | 22572786 ~ 22579398 (-) |
| LOC110525498 | shlb2 | coding | downstream | 64193 | 22550214 ~ 22572561 (-) |
| LOC110525495 | LOC102784428 | coding | downstream | 172393 | 22460769 ~ 22464361 (-) |
| LOC110525506 | LOC106585454 | coding | upstream | 7185 | 22642795 ~ 22646088 (-) |
| ptgesl | LOC106585457 | coding | upstream | 45618 | 22682585 ~ 22692496 (-) |
| derl3 | derl2 | coding | upstream | 90118 | 22727085 ~ 22730428 (-) |
| LOC110525508 | LOC106585459 | coding | upstream | 93540 | 22730507 ~ 22746609 (-) |
| LOC110525513 | LOC106585307 | coding | upstream | 121669 | 22758636 ~ 22759601 (-) |
| G486612 | NA | non-coding | downstream | 21377 | 22615099 ~ 22615377 (-) |
| G486594 | NA | non-coding | downstream | 48559 | 22587974 ~ 22588195 (-) |
| G486586 | NA | non-coding | downstream | 56548 | 22580000 ~ 22580206 (-) |
| G486575 | NA | non-coding | downstream | 93118 | 22543363 ~ 22543636 (-) |
| G486573 | NA | non-coding | downstream | 95943 | 22540602 ~ 22540811 (-) |
| G486642 | NA | non-coding | upstream | 29804 | 22666771 ~ 22667052 (-) |
| G486643 | NA | non-coding | upstream | 30849 | 22667816 ~ 22668420 (-) |
| G486647 | NA | non-coding | upstream | 37246 | 22674213 ~ 22674454 (-) |
| G486651 | NA | non-coding | upstream | 43413 | 22680380 ~ 22688647 (-) |
| G485877 | NA | other | downstream | 355728 | 22280726 ~ 22281026 (-) |
| G485864 | NA | other | downstream | 373401 | 22260634 ~ 22263353 (-) |
| G485279 | NA | other | downstream | 802394 | 21833548 ~ 21834360 (-) |
| G484895 | LOC106585423 | other | downstream | 1202035 | 21431930 ~ 21434719 (-) |
| G484807 | LOC106585304 | other | downstream | 1338581 | 21296580 ~ 21298173 (-) |
| G486716 | NA | other | upstream | 200686 | 22837653 ~ 22840566 (-) |
| G486953 | NA | other | upstream | 614319 | 23251286 ~ 23258106 (-) |
| G487022 | bicdl1 | other | upstream | 748567 | 23385534 ~ 23385907 (-) |
| G487016 | NA | other | upstream | 753050 | 23390017 ~ 23392062 (-) |
| LOC110525180 | hps4 | other | upstream | 946069 | 23582127 ~ 23587892 (-) |
