Gene
RNA
| Item | Value |
|---|---|
| gene id | G487022 |
| gene name | bicdl1 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 23385534 ~ 23385907 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| bicdl1 | Predicted to enable dynactin binding activity and small GTPase binding activity. Involved in eye development. Acts upstream of or within several processes, including embryonic camera-type eye development; negative regulation of neuron projection development; and vesicle transport along microtubule. Predicted to be located in centrosome. Is expressed in brain; pronephros; and retina. Orthologous to human BICDL1 (BICD family like cargo adaptor 1). |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU553500 | True | 374 | TUCP | 0.49 | 1 | 23385534 | 23385907 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525124 | LOC106585475 | coding | downstream | 70349 | 23223095 ~ 23315185 (-) |
| LOC110525529 | ppp1cc | coding | downstream | 321399 | 23061031 ~ 23064135 (-) |
| LOC110525530 | LOC106585473 | coding | downstream | 335735 | 23029762 ~ 23049799 (-) |
| anapc7 | LOC106585471 | coding | downstream | 387467 | 22992473 ~ 22998067 (-) |
| LOC110525519 | LOC106585467 | coding | downstream | 450382 | 22897262 ~ 22935152 (-) |
| LOC110525535 | LOC106585482 | coding | upstream | 11117 | 23397024 ~ 23410695 (-) |
| LOC110525536 | LOC106585483 | coding | upstream | 25149 | 23411056 ~ 23446557 (-) |
| LOC110525537 | pxn | coding | upstream | 73633 | 23459540 ~ 23490066 (-) |
| LOC110525539 | NA | coding | upstream | 104627 | 23490534 ~ 23492812 (-) |
| LOC110525016 | LOC106585485 | coding | upstream | 108797 | 23494704 ~ 23497340 (-) |
| G487021 | NA | non-coding | downstream | 7195 | 23378031 ~ 23378339 (-) |
| G487008 | bicdl1 | non-coding | downstream | 25506 | 23359179 ~ 23360028 (-) |
| G487005 | NA | non-coding | downstream | 29636 | 23355515 ~ 23355898 (-) |
| G487001 | NA | non-coding | downstream | 34367 | 23350693 ~ 23351167 (-) |
| G486953 | NA | non-coding | downstream | 127428 | 23251286 ~ 23258106 (-) |
| G487023 | NA | non-coding | upstream | 374 | 23386281 ~ 23386649 (-) |
| G487024 | NA | non-coding | upstream | 1092 | 23386999 ~ 23387280 (-) |
| G487025 | NA | non-coding | upstream | 1391 | 23387298 ~ 23387862 (-) |
| G487026 | NA | non-coding | upstream | 2104 | 23388011 ~ 23388560 (-) |
| G487014 | NA | non-coding | upstream | 7059 | 23392966 ~ 23393609 (-) |
| G486716 | NA | other | downstream | 544968 | 22837653 ~ 22840566 (-) |
| G485877 | NA | other | downstream | 1104508 | 22280726 ~ 22281026 (-) |
| G485864 | NA | other | downstream | 1122181 | 22260634 ~ 22263353 (-) |
| G485279 | NA | other | downstream | 1551174 | 21833548 ~ 21834360 (-) |
| G487016 | NA | other | upstream | 4110 | 23390017 ~ 23392062 (-) |
| LOC110525180 | hps4 | other | upstream | 197129 | 23582127 ~ 23587892 (-) |
| LOC110525552 | LOC106585495 | other | upstream | 327968 | 23713875 ~ 23717830 (-) |
| G488386 | NA | other | upstream | 967626 | 24353533 ~ 24353823 (-) |
| LOC110525585 | LOC106585524 | other | upstream | 1274990 | 24655788 ~ 24715090 (-) |
