Gene
RNA
| Item | Value |
|---|---|
| gene id | G487037 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 23430761 ~ 23432379 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger protein 717-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU553515 | True | 440 | lncRNA | 0.58 | 2 | 23430761 | 23432379 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525535 | LOC106585482 | coding | downstream | 20066 | 23397024 ~ 23410695 (-) |
| LOC110525124 | LOC106585475 | coding | downstream | 115576 | 23223095 ~ 23315185 (-) |
| LOC110525529 | ppp1cc | coding | downstream | 366626 | 23061031 ~ 23064135 (-) |
| LOC110525530 | LOC106585473 | coding | downstream | 380962 | 23029762 ~ 23049799 (-) |
| anapc7 | LOC106585471 | coding | downstream | 432694 | 22992473 ~ 22998067 (-) |
| LOC110525537 | pxn | coding | upstream | 27161 | 23459540 ~ 23490066 (-) |
| LOC110525539 | NA | coding | upstream | 58155 | 23490534 ~ 23492812 (-) |
| LOC110525016 | LOC106585485 | coding | upstream | 62325 | 23494704 ~ 23497340 (-) |
| LOC110525017 | LOC106585484 | coding | upstream | 74994 | 23507373 ~ 23509516 (-) |
| si:ch73-138n13.1 | LOC106585486 | coding | upstream | 78231 | 23510610 ~ 23550153 (-) |
| G487017 | NA | non-coding | downstream | 34057 | 23396381 ~ 23396704 (-) |
| G487015 | NA | non-coding | downstream | 36229 | 23393898 ~ 23394532 (-) |
| G487014 | NA | non-coding | downstream | 37152 | 23392966 ~ 23393609 (-) |
| G487026 | NA | non-coding | downstream | 42201 | 23388011 ~ 23388560 (-) |
| G487025 | NA | non-coding | downstream | 42899 | 23387298 ~ 23387862 (-) |
| G487474 | NA | non-coding | upstream | 131428 | 23563807 ~ 23564491 (-) |
| G487489 | NA | non-coding | upstream | 132553 | 23564932 ~ 23565171 (-) |
| G487491 | NA | non-coding | upstream | 137671 | 23570050 ~ 23570275 (-) |
| G487493 | NA | non-coding | upstream | 140110 | 23572489 ~ 23572730 (-) |
| G487495 | NA | non-coding | upstream | 142008 | 23574387 ~ 23574635 (-) |
| G487016 | NA | other | downstream | 38699 | 23390017 ~ 23392062 (-) |
| G487022 | bicdl1 | other | downstream | 44854 | 23385534 ~ 23385907 (-) |
| G486953 | NA | other | downstream | 177400 | 23251286 ~ 23258106 (-) |
| G486716 | NA | other | downstream | 590195 | 22837653 ~ 22840566 (-) |
| G485877 | NA | other | downstream | 1149735 | 22280726 ~ 22281026 (-) |
| LOC110525180 | hps4 | other | upstream | 150657 | 23582127 ~ 23587892 (-) |
| LOC110525552 | LOC106585495 | other | upstream | 281496 | 23713875 ~ 23717830 (-) |
| G488386 | NA | other | upstream | 921154 | 24353533 ~ 24353823 (-) |
| LOC110525585 | LOC106585524 | other | upstream | 1228518 | 24655788 ~ 24715090 (-) |
| G489038 | NA | other | upstream | 1673826 | 25106205 ~ 25106570 (-) |
