G487474


Basic Information

Item Value
gene id G487474
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 23563807 ~ 23564491 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU554006
gcgtgacaggaaagtgtttaaacccttttcaatgaagatctgtgaagttatttggatttttacgaattatctttgaaagacagggtcctgaaaaagggatgattaattttttgctgagtttatatatacaaatctgccaattaatcggtatcagctttttttggtcctccaataattgaaAAATCaaaatcagtcgacctctaatctaGACTCAGTAGCACATTTAAGTGTTGTGGTGTACTGTTTTTGCTACGTTTTTTTCACCTGTGATATGCTTTCCTGCTTATTCTAAGGTTCAGACTGAATGCAGTTGTAAATGTGCTGCTCACAATTGACAGCAGCTACATAGACCTGTTAAATTGACAAGAAAGGTGTTGATATAGTTGTGTTAAGGCATGGCTTCCTTGTTTTGAGTCTGTTAAATGTGTTTCTCATTCTGCTGGAGTGACCTAGTATTTTACATAAAACGTACCTTACGCATTCAGTTTTTCCATTTGTAACTCACCCACCAAAATCACAATATGCTGTTTTACATTGTGTTATTTCTGCTGATCTATTTCCTCATATGGAAAAGCAGAAGAATCTGTGTGCTCTCGGACAGTAATAATAGTTCCTGTGGTGCACTTTGATGTCCCATGTTTGTGACATTGATCAATACGTTTAAGGTTGACTTAAATTCAGaagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU554006 True 685 lncRNA 0.36 1 23563807 23564491

Neighbor

gene id symbol gene type direction distance location
LOC110525541 rnf10 coding downstream 3005 23550291 ~ 23560802 (-)
si:ch73-138n13.1 LOC106585486 coding downstream 13654 23510610 ~ 23550153 (-)
LOC110525017 LOC106585484 coding downstream 54291 23507373 ~ 23509516 (-)
LOC110525016 LOC106585485 coding downstream 66467 23494704 ~ 23497340 (-)
LOC110525539 NA coding downstream 70995 23490534 ~ 23492812 (-)
LOC110525180 hps4 coding upstream 17636 23582127 ~ 23587892 (-)
LOC110525543 LOC106585487 coding upstream 23739 23588230 ~ 23590352 (-)
pla2g1b LOC106585490 coding upstream 41858 23606349 ~ 23607826 (-)
aakb1 aakb1 coding upstream 50376 23614867 ~ 23617686 (-)
LOC118965070 LOC106585337 coding upstream 58316 23622807 ~ 23643348 (-)
G487037 NA non-coding downstream 131428 23430761 ~ 23432379 (-)
G487017 NA non-coding downstream 167103 23396381 ~ 23396704 (-)
G487015 NA non-coding downstream 169275 23393898 ~ 23394532 (-)
G487014 NA non-coding downstream 170198 23392966 ~ 23393609 (-)
G487026 NA non-coding downstream 175247 23388011 ~ 23388560 (-)
G487489 NA non-coding upstream 441 23564932 ~ 23565171 (-)
G487491 NA non-coding upstream 5559 23570050 ~ 23570275 (-)
G487493 NA non-coding upstream 7998 23572489 ~ 23572730 (-)
G487495 NA non-coding upstream 9896 23574387 ~ 23574635 (-)
G487016 NA other downstream 171745 23390017 ~ 23392062 (-)
G487022 bicdl1 other downstream 177900 23385534 ~ 23385907 (-)
G486953 NA other downstream 310446 23251286 ~ 23258106 (-)
G486716 NA other downstream 723241 22837653 ~ 22840566 (-)
G485877 NA other downstream 1282781 22280726 ~ 22281026 (-)
LOC110525552 LOC106585495 other upstream 149384 23713875 ~ 23717830 (-)
G488386 NA other upstream 789042 24353533 ~ 24353823 (-)
LOC110525585 LOC106585524 other upstream 1096406 24655788 ~ 24715090 (-)
G489038 NA other upstream 1541714 25106205 ~ 25106570 (-)

Expression


Co-expression Network