Gene
RNA
| Item | Value |
|---|---|
| gene id | G487529 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 23673929 ~ 23674146 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tripartite motif-containing protein 16-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU554093 | True | 218 | lncRNA | 0.53 | 1 | 23673929 | 23674146 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525548 | LOC106585492 | coding | downstream | 5561 | 23644995 ~ 23668368 (-) |
| LOC118965070 | LOC106585337 | coding | downstream | 30581 | 23622807 ~ 23643348 (-) |
| aakb1 | aakb1 | coding | downstream | 56243 | 23614867 ~ 23617686 (-) |
| pla2g1b | LOC106585490 | coding | downstream | 66103 | 23606349 ~ 23607826 (-) |
| LOC110525543 | LOC106585487 | coding | downstream | 83577 | 23588230 ~ 23590352 (-) |
| LOC110525551 | LOC106585494 | coding | upstream | 32411 | 23706557 ~ 23710228 (-) |
| LOC110525552 | LOC106585495 | coding | upstream | 39805 | 23713875 ~ 23717830 (-) |
| LOC110525553 | LOC106585496 | coding | upstream | 44234 | 23718380 ~ 23728979 (-) |
| LOC110525554 | LOC106585497 | coding | upstream | 55854 | 23730000 ~ 23750838 (-) |
| LOC110525555 | LOC106585499 | coding | upstream | 83658 | 23757804 ~ 23779720 (-) |
| G487504 | NA | non-coding | downstream | 78946 | 23594705 ~ 23594983 (-) |
| G487503 | NA | non-coding | downstream | 79775 | 23593953 ~ 23594154 (-) |
| G487501 | NA | non-coding | downstream | 82872 | 23590664 ~ 23591057 (-) |
| LOC110525180 | hps4 | non-coding | downstream | 88375 | 23582127 ~ 23587892 (-) |
| G487495 | NA | non-coding | downstream | 99294 | 23574387 ~ 23574635 (-) |
| G487538 | hnf1a | non-coding | upstream | 23072 | 23697218 ~ 23699515 (-) |
| G487546 | NA | non-coding | upstream | 29388 | 23703534 ~ 23704259 (-) |
| G487553 | NA | non-coding | upstream | 55162 | 23729308 ~ 23729536 (-) |
| G487016 | NA | other | downstream | 281867 | 23390017 ~ 23392062 (-) |
| G487022 | bicdl1 | other | downstream | 288022 | 23385534 ~ 23385907 (-) |
| G486953 | NA | other | downstream | 420568 | 23251286 ~ 23258106 (-) |
| G486716 | NA | other | downstream | 833363 | 22837653 ~ 22840566 (-) |
| G488386 | NA | other | upstream | 679387 | 24353533 ~ 24353823 (-) |
| LOC110525585 | LOC106585524 | other | upstream | 986751 | 24655788 ~ 24715090 (-) |
| G489038 | NA | other | upstream | 1432059 | 25106205 ~ 25106570 (-) |
| G489511 | hmcn2 | other | upstream | 1822817 | 25496963 ~ 25497489 (-) |
