Gene
RNA
| Item | Value |
|---|---|
| gene id | G487620 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 23839762 ~ 23839997 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU554216 | True | 236 | lncRNA | 0.40 | 1 | 23839762 | 23839997 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525558 | LOC106585502 | coding | downstream | 7221 | 23814802 ~ 23832541 (-) |
| LOC110525555 | LOC106585499 | coding | downstream | 60042 | 23757804 ~ 23779720 (-) |
| LOC110525554 | LOC106585497 | coding | downstream | 88924 | 23730000 ~ 23750838 (-) |
| LOC110525553 | LOC106585496 | coding | downstream | 110783 | 23718380 ~ 23728979 (-) |
| LOC110525552 | LOC106585495 | coding | downstream | 121932 | 23713875 ~ 23717830 (-) |
| LOC110525220 | anapc5 | coding | upstream | 10013 | 23850010 ~ 23855515 (-) |
| LOC110525561 | LOC106585505 | coding | upstream | 48657 | 23888654 ~ 23911739 (-) |
| LOC110525564 | NA | coding | upstream | 75799 | 23915796 ~ 23918064 (-) |
| LOC110525565 | LOC106585509 | coding | upstream | 103889 | 23943886 ~ 23948503 (-) |
| LOC110525566 | apja | coding | upstream | 130091 | 23970088 ~ 23972273 (-) |
| G487553 | NA | non-coding | downstream | 110226 | 23729308 ~ 23729536 (-) |
| LOC110525551 | LOC106585494 | non-coding | downstream | 129632 | 23706557 ~ 23710228 (-) |
| G487546 | NA | non-coding | downstream | 135503 | 23703534 ~ 23704259 (-) |
| G487538 | hnf1a | non-coding | downstream | 140247 | 23697218 ~ 23699515 (-) |
| G487628 | NA | non-coding | upstream | 17865 | 23857862 ~ 23863007 (-) |
| G487650 | NA | non-coding | upstream | 74369 | 23914366 ~ 23915707 (-) |
| G487655 | NA | non-coding | upstream | 87895 | 23927892 ~ 23928124 (-) |
| G487656 | NA | non-coding | upstream | 89254 | 23929251 ~ 23929771 (-) |
| G487670 | NA | non-coding | upstream | 113879 | 23953876 ~ 23954168 (-) |
| LOC110525180 | hps4 | other | downstream | 254208 | 23582127 ~ 23587892 (-) |
| G487016 | NA | other | downstream | 447700 | 23390017 ~ 23392062 (-) |
| G487022 | bicdl1 | other | downstream | 453855 | 23385534 ~ 23385907 (-) |
| G486953 | NA | other | downstream | 586401 | 23251286 ~ 23258106 (-) |
| G488386 | NA | other | upstream | 513536 | 24353533 ~ 24353823 (-) |
| LOC110525585 | LOC106585524 | other | upstream | 820900 | 24655788 ~ 24715090 (-) |
| G489038 | NA | other | upstream | 1266208 | 25106205 ~ 25106570 (-) |
| G489511 | hmcn2 | other | upstream | 1656966 | 25496963 ~ 25497489 (-) |
| LOC110525606 | LOC106585545 | other | upstream | 2439710 | 26271759 ~ 26283169 (-) |
