Gene
RNA
| Item | Value |
|---|---|
| gene id | G488543 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 24686086 ~ 24686286 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU555311 | True | 201 | lncRNA | 0.33 | 1 | 24686086 | 24686286 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ep400 | LOC106579917 | coding | downstream | 51728 | 24597970 ~ 24634358 (-) |
| LOC118965071 | LOC106585477 | coding | downstream | 106713 | 24578705 ~ 24579373 (-) |
| LOC118965019 | LOC106585477 | coding | downstream | 119762 | 24557487 ~ 24566324 (-) |
| ncor2 | LOC106585520 | coding | downstream | 181963 | 24317912 ~ 24504123 (-) |
| ccdc92 | LOC106585518 | coding | downstream | 461826 | 24211144 ~ 24224260 (-) |
| piwil1 | piwil1 | coding | upstream | 186937 | 24873223 ~ 24885005 (-) |
| LOC110525589 | LOC106585529 | coding | upstream | 225341 | 24911627 ~ 24917852 (-) |
| LOC110525591 | LOC106579906 | coding | upstream | 486575 | 25172861 ~ 25375482 (-) |
| LOC110525597 | NA | coding | upstream | 762733 | 25449019 ~ 25451212 (-) |
| LOC110525601 | LOC106585539 | coding | upstream | 956946 | 25643232 ~ 25660249 (-) |
| G488533 | NA | non-coding | downstream | 10499 | 24675321 ~ 24675587 (-) |
| G488508 | NA | non-coding | downstream | 41869 | 24643709 ~ 24644217 (-) |
| G488507 | NA | non-coding | downstream | 43307 | 24642217 ~ 24642779 (-) |
| G488506 | NA | non-coding | downstream | 43902 | 24641958 ~ 24642184 (-) |
| G488505 | NA | non-coding | downstream | 45331 | 24640525 ~ 24640755 (-) |
| G488535 | NA | non-coding | upstream | 14083 | 24700369 ~ 24700758 (-) |
| LOC110525585 | LOC106585524 | non-coding | upstream | 28161 | 24655788 ~ 24715090 (-) |
| G488574 | NA | non-coding | upstream | 58576 | 24744862 ~ 24788105 (-) |
| G488618 | NA | non-coding | upstream | 113230 | 24799516 ~ 24800711 (-) |
| G488620 | NA | non-coding | upstream | 117280 | 24803566 ~ 24804010 (-) |
| G488386 | NA | other | downstream | 332263 | 24353533 ~ 24353823 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 968303 | 23713875 ~ 23717830 (-) |
| LOC110525180 | hps4 | other | downstream | 1100532 | 23582127 ~ 23587892 (-) |
| G487016 | NA | other | downstream | 1294024 | 23390017 ~ 23392062 (-) |
| G487022 | bicdl1 | other | downstream | 1300179 | 23385534 ~ 23385907 (-) |
| G489038 | NA | other | upstream | 419919 | 25106205 ~ 25106570 (-) |
| G489511 | hmcn2 | other | upstream | 810677 | 25496963 ~ 25497489 (-) |
| LOC110525606 | LOC106585545 | other | upstream | 1593421 | 26271759 ~ 26283169 (-) |
| tmem230b | LOC106585554 | other | upstream | 1769446 | 26455731 ~ 26457883 (-) |
| LOC110525619 | LOC106585557 | other | upstream | 1860936 | 26481087 ~ 26551627 (-) |
