Gene
RNA
| Item | Value |
|---|---|
| gene id | G488710 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 24938299 ~ 24938515 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU555496 | True | 217 | lncRNA | 0.38 | 1 | 24938299 | 24938515 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525589 | LOC106585529 | coding | downstream | 20447 | 24911627 ~ 24917852 (-) |
| piwil1 | piwil1 | coding | downstream | 53294 | 24873223 ~ 24885005 (-) |
| LOC110525585 | LOC106585524 | coding | downstream | 223209 | 24655788 ~ 24715090 (-) |
| ep400 | LOC106579917 | coding | downstream | 303941 | 24597970 ~ 24634358 (-) |
| LOC118965071 | LOC106585477 | coding | downstream | 358926 | 24578705 ~ 24579373 (-) |
| LOC110525591 | LOC106579906 | coding | upstream | 234346 | 25172861 ~ 25375482 (-) |
| LOC110525597 | NA | coding | upstream | 510504 | 25449019 ~ 25451212 (-) |
| LOC110525601 | LOC106585539 | coding | upstream | 704717 | 25643232 ~ 25660249 (-) |
| lmx1bb | LOC106585540 | coding | upstream | 765659 | 25704174 ~ 25768796 (-) |
| pbx3b | LOC106585542 | coding | upstream | 1040439 | 25978954 ~ 26067633 (-) |
| G488709 | NA | non-coding | downstream | 1728 | 24936332 ~ 24936571 (-) |
| G488700 | NA | non-coding | downstream | 14411 | 24923679 ~ 24923888 (-) |
| G488697 | NA | non-coding | downstream | 16868 | 24921185 ~ 24921431 (-) |
| G488694 | NA | non-coding | downstream | 18863 | 24919133 ~ 24919436 (-) |
| G488693 | NA | non-coding | downstream | 30857 | 24907224 ~ 24907442 (-) |
| G488711 | NA | non-coding | upstream | 208 | 24938723 ~ 24939248 (-) |
| G488715 | NA | non-coding | upstream | 8930 | 24947445 ~ 24947827 (-) |
| G488716 | NA | non-coding | upstream | 9970 | 24948485 ~ 24948718 (-) |
| G488749 | NA | non-coding | upstream | 50416 | 24988931 ~ 24989138 (-) |
| G488750 | NA | non-coding | upstream | 50718 | 24989233 ~ 24989536 (-) |
| G488386 | NA | other | downstream | 584476 | 24353533 ~ 24353823 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 1220516 | 23713875 ~ 23717830 (-) |
| LOC110525180 | hps4 | other | downstream | 1352745 | 23582127 ~ 23587892 (-) |
| G487016 | NA | other | downstream | 1546237 | 23390017 ~ 23392062 (-) |
| G489038 | NA | other | upstream | 167690 | 25106205 ~ 25106570 (-) |
| G489511 | hmcn2 | other | upstream | 558448 | 25496963 ~ 25497489 (-) |
| LOC110525606 | LOC106585545 | other | upstream | 1341192 | 26271759 ~ 26283169 (-) |
| tmem230b | LOC106585554 | other | upstream | 1517217 | 26455731 ~ 26457883 (-) |
| LOC110525619 | LOC106585557 | other | upstream | 1608707 | 26481087 ~ 26551627 (-) |
