Gene
RNA
| Item | Value |
|---|---|
| gene id | G488716 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 24948485 ~ 24948718 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC105416325 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU555502 | True | 234 | lncRNA | 0.57 | 1 | 24948485 | 24948718 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525589 | LOC106585529 | coding | downstream | 30633 | 24911627 ~ 24917852 (-) |
| piwil1 | piwil1 | coding | downstream | 63480 | 24873223 ~ 24885005 (-) |
| LOC110525585 | LOC106585524 | coding | downstream | 233395 | 24655788 ~ 24715090 (-) |
| ep400 | LOC106579917 | coding | downstream | 314127 | 24597970 ~ 24634358 (-) |
| LOC118965071 | LOC106585477 | coding | downstream | 369112 | 24578705 ~ 24579373 (-) |
| LOC110525591 | LOC106579906 | coding | upstream | 224143 | 25172861 ~ 25375482 (-) |
| LOC110525597 | NA | coding | upstream | 500301 | 25449019 ~ 25451212 (-) |
| LOC110525601 | LOC106585539 | coding | upstream | 694514 | 25643232 ~ 25660249 (-) |
| lmx1bb | LOC106585540 | coding | upstream | 755456 | 25704174 ~ 25768796 (-) |
| pbx3b | LOC106585542 | coding | upstream | 1030236 | 25978954 ~ 26067633 (-) |
| G488715 | NA | non-coding | downstream | 658 | 24947445 ~ 24947827 (-) |
| G488711 | NA | non-coding | downstream | 9237 | 24938723 ~ 24939248 (-) |
| G488710 | NA | non-coding | downstream | 9970 | 24938299 ~ 24938515 (-) |
| G488709 | NA | non-coding | downstream | 11914 | 24936332 ~ 24936571 (-) |
| G488700 | NA | non-coding | downstream | 24597 | 24923679 ~ 24923888 (-) |
| G488749 | NA | non-coding | upstream | 40213 | 24988931 ~ 24989138 (-) |
| G488750 | NA | non-coding | upstream | 40515 | 24989233 ~ 24989536 (-) |
| G488751 | NA | non-coding | upstream | 42014 | 24990732 ~ 24991105 (-) |
| G488777 | NA | non-coding | upstream | 82953 | 25031671 ~ 25035179 (-) |
| G488810 | NA | non-coding | upstream | 118496 | 25067214 ~ 25067753 (-) |
| G488386 | NA | other | downstream | 594662 | 24353533 ~ 24353823 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 1230702 | 23713875 ~ 23717830 (-) |
| LOC110525180 | hps4 | other | downstream | 1362931 | 23582127 ~ 23587892 (-) |
| G487016 | NA | other | downstream | 1556423 | 23390017 ~ 23392062 (-) |
| G489038 | NA | other | upstream | 157487 | 25106205 ~ 25106570 (-) |
| G489511 | hmcn2 | other | upstream | 548245 | 25496963 ~ 25497489 (-) |
| LOC110525606 | LOC106585545 | other | upstream | 1330989 | 26271759 ~ 26283169 (-) |
| tmem230b | LOC106585554 | other | upstream | 1507014 | 26455731 ~ 26457883 (-) |
| LOC110525619 | LOC106585557 | other | upstream | 1598504 | 26481087 ~ 26551627 (-) |
