Gene
RNA
| Item | Value |
|---|---|
| gene id | G488749 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 24988931 ~ 24989138 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU555536 | True | 208 | lncRNA | 0.46 | 1 | 24988931 | 24989138 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525589 | LOC106585529 | coding | downstream | 71079 | 24911627 ~ 24917852 (-) |
| piwil1 | piwil1 | coding | downstream | 103926 | 24873223 ~ 24885005 (-) |
| LOC110525585 | LOC106585524 | coding | downstream | 273841 | 24655788 ~ 24715090 (-) |
| ep400 | LOC106579917 | coding | downstream | 354573 | 24597970 ~ 24634358 (-) |
| LOC118965071 | LOC106585477 | coding | downstream | 409558 | 24578705 ~ 24579373 (-) |
| LOC110525591 | LOC106579906 | coding | upstream | 183723 | 25172861 ~ 25375482 (-) |
| LOC110525597 | NA | coding | upstream | 459881 | 25449019 ~ 25451212 (-) |
| LOC110525601 | LOC106585539 | coding | upstream | 654094 | 25643232 ~ 25660249 (-) |
| lmx1bb | LOC106585540 | coding | upstream | 715036 | 25704174 ~ 25768796 (-) |
| pbx3b | LOC106585542 | coding | upstream | 989816 | 25978954 ~ 26067633 (-) |
| G488716 | NA | non-coding | downstream | 40213 | 24948485 ~ 24948718 (-) |
| G488715 | NA | non-coding | downstream | 41104 | 24947445 ~ 24947827 (-) |
| G488711 | NA | non-coding | downstream | 49683 | 24938723 ~ 24939248 (-) |
| G488710 | NA | non-coding | downstream | 50416 | 24938299 ~ 24938515 (-) |
| G488709 | NA | non-coding | downstream | 52360 | 24936332 ~ 24936571 (-) |
| G488750 | NA | non-coding | upstream | 95 | 24989233 ~ 24989536 (-) |
| G488751 | NA | non-coding | upstream | 1594 | 24990732 ~ 24991105 (-) |
| G488777 | NA | non-coding | upstream | 42533 | 25031671 ~ 25035179 (-) |
| G488810 | NA | non-coding | upstream | 78076 | 25067214 ~ 25067753 (-) |
| G489019 | NA | non-coding | upstream | 89439 | 25078577 ~ 25078897 (-) |
| G488386 | NA | other | downstream | 635108 | 24353533 ~ 24353823 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 1271148 | 23713875 ~ 23717830 (-) |
| LOC110525180 | hps4 | other | downstream | 1403377 | 23582127 ~ 23587892 (-) |
| G487016 | NA | other | downstream | 1596869 | 23390017 ~ 23392062 (-) |
| G489038 | NA | other | upstream | 117067 | 25106205 ~ 25106570 (-) |
| G489511 | hmcn2 | other | upstream | 507825 | 25496963 ~ 25497489 (-) |
| LOC110525606 | LOC106585545 | other | upstream | 1290569 | 26271759 ~ 26283169 (-) |
| tmem230b | LOC106585554 | other | upstream | 1466594 | 26455731 ~ 26457883 (-) |
| LOC110525619 | LOC106585557 | other | upstream | 1558084 | 26481087 ~ 26551627 (-) |
