Gene
RNA
| Item | Value |
|---|---|
| gene id | G489031 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 25099061 ~ 25099275 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU555819 | True | 215 | lncRNA | 0.40 | 1 | 25099061 | 25099275 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525589 | LOC106585529 | coding | downstream | 181209 | 24911627 ~ 24917852 (-) |
| piwil1 | piwil1 | coding | downstream | 214056 | 24873223 ~ 24885005 (-) |
| LOC110525585 | LOC106585524 | coding | downstream | 383971 | 24655788 ~ 24715090 (-) |
| ep400 | LOC106579917 | coding | downstream | 464703 | 24597970 ~ 24634358 (-) |
| LOC118965071 | LOC106585477 | coding | downstream | 519688 | 24578705 ~ 24579373 (-) |
| LOC110525591 | LOC106579906 | coding | upstream | 73586 | 25172861 ~ 25375482 (-) |
| LOC110525597 | NA | coding | upstream | 349744 | 25449019 ~ 25451212 (-) |
| LOC110525601 | LOC106585539 | coding | upstream | 543957 | 25643232 ~ 25660249 (-) |
| lmx1bb | LOC106585540 | coding | upstream | 604899 | 25704174 ~ 25768796 (-) |
| pbx3b | LOC106585542 | coding | upstream | 879679 | 25978954 ~ 26067633 (-) |
| G489029 | NA | non-coding | downstream | 1833 | 25096724 ~ 25097228 (-) |
| G489028 | NA | non-coding | downstream | 2798 | 25095978 ~ 25096263 (-) |
| G489019 | NA | non-coding | downstream | 20164 | 25078577 ~ 25078897 (-) |
| G488810 | NA | non-coding | downstream | 31308 | 25067214 ~ 25067753 (-) |
| G488777 | NA | non-coding | downstream | 63882 | 25031671 ~ 25035179 (-) |
| G489034 | NA | non-coding | upstream | 2835 | 25102110 ~ 25102516 (-) |
| G489035 | NA | non-coding | upstream | 3365 | 25102640 ~ 25103085 (-) |
| G489044 | NA | non-coding | upstream | 13089 | 25112364 ~ 25112654 (-) |
| G489048 | LOC106585531 | non-coding | upstream | 18367 | 25117642 ~ 25117916 (-) |
| G489052 | NA | non-coding | upstream | 22740 | 25122015 ~ 25122298 (-) |
| G488386 | NA | other | downstream | 745238 | 24353533 ~ 24353823 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 1381278 | 23713875 ~ 23717830 (-) |
| LOC110525180 | hps4 | other | downstream | 1513507 | 23582127 ~ 23587892 (-) |
| G487016 | NA | other | downstream | 1706999 | 23390017 ~ 23392062 (-) |
| G489038 | NA | other | upstream | 6930 | 25106205 ~ 25106570 (-) |
| G489511 | hmcn2 | other | upstream | 397688 | 25496963 ~ 25497489 (-) |
| LOC110525606 | LOC106585545 | other | upstream | 1180432 | 26271759 ~ 26283169 (-) |
| tmem230b | LOC106585554 | other | upstream | 1356457 | 26455731 ~ 26457883 (-) |
| LOC110525619 | LOC106585557 | other | upstream | 1447947 | 26481087 ~ 26551627 (-) |
