Gene
RNA
| Item | Value |
|---|---|
| gene id | G489332 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 25460391 ~ 25460724 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU556130 | True | 334 | lncRNA | 0.39 | 1 | 25460391 | 25460724 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525597 | NA | coding | downstream | 9179 | 25449019 ~ 25451212 (-) |
| LOC110525591 | LOC106579906 | coding | downstream | 84909 | 25172861 ~ 25375482 (-) |
| LOC110525589 | LOC106585529 | coding | downstream | 542539 | 24911627 ~ 24917852 (-) |
| piwil1 | piwil1 | coding | downstream | 575386 | 24873223 ~ 24885005 (-) |
| LOC110525585 | LOC106585524 | coding | downstream | 745301 | 24655788 ~ 24715090 (-) |
| LOC110525601 | LOC106585539 | coding | upstream | 182508 | 25643232 ~ 25660249 (-) |
| lmx1bb | LOC106585540 | coding | upstream | 243450 | 25704174 ~ 25768796 (-) |
| pbx3b | LOC106585542 | coding | upstream | 518230 | 25978954 ~ 26067633 (-) |
| LOC110525604 | LOC106585543 | coding | upstream | 773828 | 26234552 ~ 26264035 (-) |
| LOC110525606 | LOC106585545 | coding | upstream | 811035 | 26271759 ~ 26283169 (-) |
| G489309 | NA | non-coding | downstream | 2273 | 25455097 ~ 25458118 (-) |
| G489329 | LOC106585340 | non-coding | downstream | 22423 | 25437663 ~ 25437968 (-) |
| G489328 | NA | non-coding | downstream | 24432 | 25435443 ~ 25435959 (-) |
| G489311 | NA | non-coding | downstream | 25778 | 25433514 ~ 25434613 (-) |
| G489333 | NA | non-coding | upstream | 652 | 25461376 ~ 25461681 (-) |
| G489336 | NA | non-coding | upstream | 5036 | 25465760 ~ 25466022 (-) |
| G489322 | NA | non-coding | upstream | 28438 | 25489162 ~ 25490155 (-) |
| G489518 | NA | non-coding | upstream | 47264 | 25507988 ~ 25508249 (-) |
| G489520 | NA | non-coding | upstream | 50445 | 25511169 ~ 25511388 (-) |
| G489038 | NA | other | downstream | 353821 | 25106205 ~ 25106570 (-) |
| G488386 | NA | other | downstream | 1106568 | 24353533 ~ 24353823 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 1742608 | 23713875 ~ 23717830 (-) |
| LOC110525180 | hps4 | other | downstream | 1874837 | 23582127 ~ 23587892 (-) |
| G489511 | hmcn2 | other | upstream | 36239 | 25496963 ~ 25497489 (-) |
| tmem230b | LOC106585554 | other | upstream | 995008 | 26455731 ~ 26457883 (-) |
| LOC110525619 | LOC106585557 | other | upstream | 1086498 | 26481087 ~ 26551627 (-) |
| G491291 | NA | other | upstream | 1364143 | 26824867 ~ 26867158 (-) |
