Gene
RNA
| Item | Value |
|---|---|
| gene id | G489336 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 25465760 ~ 25466022 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU556138 | True | 201 | lncRNA | 0.37 | 2 | 25465760 | 25466022 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110525597 | NA | coding | downstream | 14548 | 25449019 ~ 25451212 (-) |
| LOC110525591 | LOC106579906 | coding | downstream | 90278 | 25172861 ~ 25375482 (-) |
| LOC110525589 | LOC106585529 | coding | downstream | 547908 | 24911627 ~ 24917852 (-) |
| piwil1 | piwil1 | coding | downstream | 580755 | 24873223 ~ 24885005 (-) |
| LOC110525585 | LOC106585524 | coding | downstream | 750670 | 24655788 ~ 24715090 (-) |
| LOC110525601 | LOC106585539 | coding | upstream | 177210 | 25643232 ~ 25660249 (-) |
| lmx1bb | LOC106585540 | coding | upstream | 238152 | 25704174 ~ 25768796 (-) |
| pbx3b | LOC106585542 | coding | upstream | 512932 | 25978954 ~ 26067633 (-) |
| LOC110525604 | LOC106585543 | coding | upstream | 768530 | 26234552 ~ 26264035 (-) |
| LOC110525606 | LOC106585545 | coding | upstream | 805737 | 26271759 ~ 26283169 (-) |
| G489333 | NA | non-coding | downstream | 4079 | 25461376 ~ 25461681 (-) |
| G489332 | NA | non-coding | downstream | 5036 | 25460391 ~ 25460724 (-) |
| G489309 | NA | non-coding | downstream | 7642 | 25455097 ~ 25458118 (-) |
| G489329 | LOC106585340 | non-coding | downstream | 27792 | 25437663 ~ 25437968 (-) |
| G489322 | NA | non-coding | upstream | 23140 | 25489162 ~ 25490155 (-) |
| G489518 | NA | non-coding | upstream | 41966 | 25507988 ~ 25508249 (-) |
| G489520 | NA | non-coding | upstream | 45147 | 25511169 ~ 25511388 (-) |
| G489524 | hmcn2 | non-coding | upstream | 51389 | 25517411 ~ 25517656 (-) |
| G489527 | NA | non-coding | upstream | 53687 | 25519709 ~ 25519913 (-) |
| G489038 | NA | other | downstream | 359190 | 25106205 ~ 25106570 (-) |
| G488386 | NA | other | downstream | 1111937 | 24353533 ~ 24353823 (-) |
| LOC110525552 | LOC106585495 | other | downstream | 1747977 | 23713875 ~ 23717830 (-) |
| LOC110525180 | hps4 | other | downstream | 1880206 | 23582127 ~ 23587892 (-) |
| G489511 | hmcn2 | other | upstream | 30941 | 25496963 ~ 25497489 (-) |
| tmem230b | LOC106585554 | other | upstream | 989710 | 26455731 ~ 26457883 (-) |
| LOC110525619 | LOC106585557 | other | upstream | 1081200 | 26481087 ~ 26551627 (-) |
| G491291 | NA | other | upstream | 1358845 | 26824867 ~ 26867158 (-) |
