G490621


Basic Information

Item Value
gene id G490621
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 26467521 ~ 26468331 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU557501
gcagcattgtgacgtatttgtaggcatatcattggaagattggccataagagactacattttccagaggtccgcccggtgtcctttgtctaaatttgtgcgtaatcttcaggtgcaggcattttctcctgggattcaggagagaaaccatgtttccaagaacgatgtatcaatgaagagatatgtgaaaaacaccttgaggattgattctaaacaacgtctgccatgttttcagtcgatattatggagttaatttggagaaaagtttgcgttttgaggactgaatttatggattttttttggtagccaaatgtgatgtataaaacggagctatttctaatacacaaggaatctttttggaaaaactgagcatctgctatctaactgagagtatcctcattgaaaacatcagaagttcttcaaaggaaaaactgaacatttgct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU557501 True 443 lncRNA 0.38 2 26467521 26468331

Neighbor

gene id symbol gene type direction distance location
tmem230b LOC106585554 coding downstream 9638 26455731 ~ 26457883 (-)
igsf9b LOC106585552 coding downstream 12101 26404186 ~ 26455420 (-)
LOC110525611 LOC106585549 coding downstream 76230 26382960 ~ 26391291 (-)
LOC110525608 NA coding downstream 132688 26330079 ~ 26334833 (-)
LOC110525607 LOC106585546 coding downstream 150205 26293688 ~ 26317316 (-)
dpysl2a LOC106585556 coding upstream 34613 26502944 ~ 26530832 (-)
LOC110525619 LOC106585557 coding upstream 66697 26481087 ~ 26551627 (-)
LOC110525620 LOC106585558 coding upstream 85207 26553538 ~ 26564330 (-)
LOC110525621 LOC106585565 coding upstream 173930 26608848 ~ 26711398 (-)
LOC110525622 NA coding upstream 245125 26713456 ~ 26724026 (-)
G490616 NA non-coding downstream 1242 26466002 ~ 26466279 (-)
G490517 NA non-coding downstream 77376 26389780 ~ 26390145 (-)
G490513 LOC106585548 non-coding downstream 97143 26369257 ~ 26370378 (-)
G490511 NA non-coding downstream 102076 26365205 ~ 26365445 (-)
G490506 NA non-coding downstream 111649 26355414 ~ 26355872 (-)
G490886 NA non-coding upstream 75159 26543490 ~ 26544586 (-)
G490963 NA non-coding upstream 238771 26707102 ~ 26729484 (-)
G490978 NA non-coding upstream 277911 26746242 ~ 26750563 (-)
LOC110525606 LOC106585545 other downstream 184352 26271759 ~ 26283169 (-)
G489511 hmcn2 other downstream 970032 25496963 ~ 25497489 (-)
G489038 NA other downstream 1360951 25106205 ~ 25106570 (-)
LOC110525585 LOC106585524 other downstream 1758101 24655788 ~ 24715090 (-)
G491291 NA other upstream 356536 26824867 ~ 26867158 (-)
G491539 NA other upstream 748276 27216607 ~ 27244193 (-)
LOC110525653 NA other upstream 1266665 27734995 ~ 27737024 (-)
LOC110525655 LOC106585601 other upstream 1358900 27827231 ~ 27885634 (-)

Expression


Co-expression Network