G491492


Basic Information

Item Value
gene id G491492
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 27144879 ~ 27145306 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU558522
cgcgaactgctcgccatccggttagccctaggcgaatggcgacagtggttggagggggcgaccgttccttttgtcgtttggactgaccataggaaccttgagtacatccgttctgccaaacgacttaatgcgcgtcaggcgcgttgggcgctgtttttcgctcgtttcgagttcgtgatttcttatcgtccgggctctaagaacaccaagcctgatgctttatctcgtctcttcagttcttcagtagcctccactgaccccgaggggattctccctgaggggcgtgttgtcgggttgactgtctggggaattgagaggcaggtaaagcaagcgctcactcacactccgtcgccgcgcgcttgtcctaggaaccttattttcgttcccgttcctactcgtctggccgttcttcagtgggctcactctgc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU558522 True 428 lncRNA 0.56 1 27144879 27145306

Neighbor

gene id symbol gene type direction distance location
LOC110525629 LOC106585566 coding downstream 256574 26883863 ~ 26888305 (-)
LOC118965120 NA coding downstream 267425 26877322 ~ 26877454 (-)
LOC110525627 LOC106585561 coding downstream 268836 26828158 ~ 26876043 (-)
LOC110525624 LOC100380864 coding downstream 404236 26738279 ~ 26740643 (-)
LOC110525623 cenpe coding downstream 411935 26726252 ~ 26732944 (-)
LOC110525021 nkx31 coding upstream 105752 27251058 ~ 27252377 (-)
LOC110525638 LOC106585585 coding upstream 125515 27270821 ~ 27278551 (-)
LOC110525639 LOC106579858 coding upstream 197639 27342945 ~ 27351891 (-)
LOC110525643 LOC106585590 coding upstream 400302 27545608 ~ 27560556 (-)
LOC110525644 LOC106585592 coding upstream 416251 27561557 ~ 27578521 (-)
G491435 LOC106585567 non-coding downstream 4125 27138156 ~ 27140754 (-)
G491475 LOC106585563 non-coding downstream 34741 27109374 ~ 27110138 (-)
G491417 LOC106585572 non-coding downstream 105005 27039044 ~ 27039874 (-)
G491027 NA non-coding downstream 321722 26822893 ~ 26823157 (-)
G490982 NA non-coding downstream 326254 26755780 ~ 26818625 (-)
G491497 NA non-coding upstream 8400 27153706 ~ 27192358 (-)
G491598 NA non-coding upstream 171572 27316878 ~ 27317100 (-)
G491602 NA non-coding upstream 174823 27320129 ~ 27320361 (-)
G491603 NA non-coding upstream 175102 27320408 ~ 27320638 (-)
G492067 NA non-coding upstream 350871 27496177 ~ 27506760 (-)
G491291 NA other downstream 277721 26824867 ~ 26867158 (-)
LOC110525619 LOC106585557 other downstream 593252 26481087 ~ 26551627 (-)
tmem230b LOC106585554 other downstream 687038 26455731 ~ 26457883 (-)
LOC110525606 LOC106585545 other downstream 861710 26271759 ~ 26283169 (-)
G489511 hmcn2 other downstream 1647390 25496963 ~ 25497489 (-)
G491539 NA other upstream 71301 27216607 ~ 27244193 (-)
LOC110525653 NA other upstream 589690 27734995 ~ 27737024 (-)
LOC110525655 LOC106585601 other upstream 681925 27827231 ~ 27885634 (-)
G494389 LOC106585296 other upstream 2265909 29411215 ~ 29415314 (-)
LOC110525681 hectd4 other upstream 2333349 29411204 ~ 29483533 (-)

Expression


Co-expression Network