G492067


Basic Information

Item Value
gene id G492067
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 27496177 ~ 27506760 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU559124
ttcccctcaatctacacacaaatccccataatgacaaagtgaaaagtttATTTTTGCACATTGattcaaaataaaaacagaaataccttatttacataagtattcagaccctttgctatgatacttgaaattgcatcctgtttccattgatcatccttgagatgtttctacaacttgattggagttcacctgtggtaaattcaattgattggacatgatttggaaaggcacaaacctgtctatataaggtcccacagttgacagtgcatgtcagagcaaaaaaccaagccatgaggttgaaggaattgtacaTAGAGctcccgagacaggattgtgtcgaggcacagatccggggaagggtaccaaaaaatgtctgcagcattgaaggtccccaagaacacagtggcatccatcattcttaaatggaagaagtttggaaccaccaagactcttccttgagttggccacctggccaaactgagcaatcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU559124 True 488 lncRNA 0.41 2 27496177 27506760

Neighbor

gene id symbol gene type direction distance location
LOC110525639 LOC106579858 coding downstream 144286 27342945 ~ 27351891 (-)
LOC110525638 LOC106585585 coding downstream 217626 27270821 ~ 27278551 (-)
LOC110525021 nkx31 coding downstream 243800 27251058 ~ 27252377 (-)
LOC110525629 LOC106585566 coding downstream 607872 26883863 ~ 26888305 (-)
LOC118965120 NA coding downstream 618723 26877322 ~ 26877454 (-)
LOC110525643 LOC106585590 coding upstream 38848 27545608 ~ 27560556 (-)
LOC110525644 LOC106585592 coding upstream 54797 27561557 ~ 27578521 (-)
LOC110525648 LOC106585594 coding upstream 146025 27652785 ~ 27705710 (-)
LOC110525649 LOC106585595 coding upstream 207371 27714131 ~ 27724003 (-)
LOC110525653 NA coding upstream 228235 27734995 ~ 27737024 (-)
G491603 NA non-coding downstream 175539 27320408 ~ 27320638 (-)
G491602 NA non-coding downstream 175816 27320129 ~ 27320361 (-)
G491598 NA non-coding downstream 179077 27316878 ~ 27317100 (-)
G491497 NA non-coding downstream 303819 27153706 ~ 27192358 (-)
G491492 NA non-coding downstream 350871 27144879 ~ 27145306 (-)
G492122 NA non-coding upstream 94585 27601345 ~ 27601642 (-)
G492127 NA non-coding upstream 99925 27606685 ~ 27607004 (-)
G492145 NA non-coding upstream 120520 27627280 ~ 27627646 (-)
G492146 LOC106585319 non-coding upstream 121131 27627891 ~ 27628877 (-)
G492157 NA non-coding upstream 138315 27645075 ~ 27645708 (-)
G491539 NA other downstream 251984 27216607 ~ 27244193 (-)
G491291 NA other downstream 629019 26824867 ~ 26867158 (-)
LOC110525619 LOC106585557 other downstream 944550 26481087 ~ 26551627 (-)
tmem230b LOC106585554 other downstream 1038336 26455731 ~ 26457883 (-)
LOC110525606 LOC106585545 other downstream 1213008 26271759 ~ 26283169 (-)
LOC110525655 LOC106585601 other upstream 320471 27827231 ~ 27885634 (-)
G494389 LOC106585296 other upstream 1904455 29411215 ~ 29415314 (-)
LOC110525681 hectd4 other upstream 1971895 29411204 ~ 29483533 (-)
LOC110525684 LOC106585295 other upstream 1995493 29502192 ~ 29520980 (-)

Expression


Co-expression Network