G492569


Basic Information

Item Value
gene id G492569
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 28151359 ~ 28153068 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU559694
catccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctccctgcgcttttgacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcaccattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagttagaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatttttgaagcctgaaatgtggcaaaagttcgcaaagttcaagggggccgaatactttcgcaag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU559694 True 638 lncRNA 0.41 2 28151359 28153068

Neighbor

gene id symbol gene type direction distance location
LOC110525659 LOC106585607 coding downstream 46190 28044805 ~ 28105169 (-)
LOC110525658 LOC100195761 coding downstream 107059 28028176 ~ 28044300 (-)
LOC110525655 LOC106585601 coding downstream 284079 27827231 ~ 27885634 (-)
LOC118965072 LOC106579843 coding downstream 331157 27817576 ~ 27820202 (-)
LOC110525654 LOC106585600 coding downstream 338477 27798270 ~ 27812882 (-)
LOC110525662 LOC106585608 coding upstream 40440 28193508 ~ 28247237 (-)
LOC110525663 lincr coding upstream 103420 28256488 ~ 28259851 (-)
LOC118964856 NA coding upstream 113749 28266817 ~ 28273722 (-)
LOC110525665 LOC106585609 coding upstream 123595 28276663 ~ 28309727 (-)
LOC110525666 LOC106585610 coding upstream 160245 28313313 ~ 28352749 (-)
G492556 NA non-coding downstream 22121 28128345 ~ 28129238 (-)
G492527 NA non-coding downstream 82324 28068755 ~ 28069035 (-)
G492526 NA non-coding downstream 84613 28066537 ~ 28066746 (-)
G492298 NA non-coding downstream 235624 27915507 ~ 27915735 (-)
G492297 NA non-coding downstream 236062 27915047 ~ 27915297 (-)
G492594 NA non-coding upstream 28428 28181496 ~ 28181863 (-)
G492596 NA non-coding upstream 32502 28185570 ~ 28185808 (-)
G492960 NA non-coding upstream 223899 28376967 ~ 28377231 (-)
LOC110525653 NA other downstream 414381 27734995 ~ 27737024 (-)
G491539 NA other downstream 907166 27216607 ~ 27244193 (-)
G491291 NA other downstream 1284201 26824867 ~ 26867158 (-)
LOC110525619 LOC106585557 other downstream 1599732 26481087 ~ 26551627 (-)
G494389 LOC106585296 other upstream 1258147 29411215 ~ 29415314 (-)
LOC110525681 hectd4 other upstream 1325587 29411204 ~ 29483533 (-)
LOC110525684 LOC106585295 other upstream 1349185 29502192 ~ 29520980 (-)
G494542 NA other upstream 1522255 29675323 ~ 29675573 (-)
LOC110525714 LOC106585251 other upstream 2373618 30526034 ~ 30527686 (-)

Expression


Co-expression Network