Gene
RNA
| Item | Value |
|---|---|
| gene id | G493100 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 28645501 ~ 28645773 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU560279 | True | 273 | lncRNA | 0.45 | 1 | 28645501 | 28645773 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:153044 | dus18 | coding | downstream | 89488 | 28552264 ~ 28556013 (-) |
| ube2d4 | UBE2D4 | coding | downstream | 177636 | 28455590 ~ 28467865 (-) |
| dbnlb | dbnl | coding | downstream | 197318 | 28430078 ~ 28448183 (-) |
| arid5a | LOC106585613 | coding | downstream | 220276 | 28414737 ~ 28425225 (-) |
| LOC110525671 | sld5 | coding | downstream | 231028 | 28403084 ~ 28414473 (-) |
| LOC110525678 | LOC106585621 | coding | upstream | 343634 | 28989407 ~ 29010716 (-) |
| LOC110525679 | LOC106585622 | coding | upstream | 377435 | 29023208 ~ 29070012 (-) |
| LOC110526490 | LOC106580375 | coding | upstream | 424943 | 29070716 ~ 29398888 (-) |
| LOC110525681 | hectd4 | coding | upstream | 765431 | 29411204 ~ 29483533 (-) |
| LOC110525683 | NA | coding | upstream | 768988 | 29414761 ~ 29415342 (-) |
| G493099 | NA | non-coding | downstream | 1849 | 28643354 ~ 28643652 (-) |
| G493098 | NA | non-coding | downstream | 4921 | 28640221 ~ 28640580 (-) |
| G493096 | NA | non-coding | downstream | 5702 | 28639543 ~ 28639799 (-) |
| G493095 | NA | non-coding | downstream | 11190 | 28634054 ~ 28634311 (-) |
| G493094 | NA | non-coding | downstream | 11793 | 28633494 ~ 28633708 (-) |
| G493116 | NA | non-coding | upstream | 18754 | 28664527 ~ 28664885 (-) |
| G493185 | NA | non-coding | upstream | 78584 | 28724357 ~ 28724817 (-) |
| G493234 | NA | non-coding | upstream | 125317 | 28771090 ~ 28771341 (-) |
| G493251 | NA | non-coding | upstream | 138103 | 28783876 ~ 28784129 (-) |
| G493259 | NA | non-coding | upstream | 145404 | 28791177 ~ 28791497 (-) |
| LOC110525655 | LOC106585601 | other | downstream | 810199 | 27827231 ~ 27885634 (-) |
| LOC110525653 | NA | other | downstream | 908523 | 27734995 ~ 27737024 (-) |
| G491539 | NA | other | downstream | 1401308 | 27216607 ~ 27244193 (-) |
| G491291 | NA | other | downstream | 1778343 | 26824867 ~ 26867158 (-) |
| LOC110525619 | LOC106585557 | other | downstream | 2093874 | 26481087 ~ 26551627 (-) |
| G494389 | LOC106585296 | other | upstream | 765442 | 29411215 ~ 29415314 (-) |
| LOC110525684 | LOC106585295 | other | upstream | 856480 | 29502192 ~ 29520980 (-) |
| G494542 | NA | other | upstream | 1029550 | 29675323 ~ 29675573 (-) |
| LOC110525714 | LOC106585251 | other | upstream | 1880913 | 30526034 ~ 30527686 (-) |
