G494515



Basic Information


Item Value
gene id G494515
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 29635128 ~ 29635482 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU561834
tctgtgaagagcacagggcgccagtggcgaatttgccaatcttggtgttctctggcaaatgaaaaacgtcctgcacggtgttgggctgtaagcacaacccccacctgtggacgacgggccctcataccaccctcatggagtctgtttctgaccgtttgagcagacacatgcacatttgtggcctgctggaggtcattttgcagggctctggcagtgctcctccttgcacaaaggcggaggtagcggtcctactgctgggttgttgccctcctacggcctcctccacgtctcctgatgtactggcctgtctcctggtagcgcctccatgctttggacactacgctgacagacacag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU561834 True 355 lncRNA 0.57 1 29635128 29635482

Neighbor


gene id symbol gene type direction distance location
LOC110526522 LOC106585290 coding downstream 38319 29595416 ~ 29596809 (-)
LOC110525685 LOC106585294 coding downstream 59530 29526783 ~ 29575598 (-)
LOC110525684 LOC106585295 coding downstream 114148 29502192 ~ 29520980 (-)
LOC110525681 hectd4 coding downstream 151595 29411204 ~ 29483533 (-)
LOC110525693 NA coding upstream 14721 29650203 ~ 29654088 (-)
LOC110525694 LOC106585282 coding upstream 70577 29706059 ~ 29754403 (-)
LOC110525696 LOC106585281 coding upstream 119420 29754902 ~ 29760372 (-)
LOC110525697 rsrc2 coding upstream 134442 29769924 ~ 29786928 (-)
LOC118965073 NA coding upstream 163027 29798141 ~ 29811783 (-)
G494511 NA non-coding downstream 2689 29632237 ~ 29632439 (-)
G494507 NA non-coding downstream 6341 29628452 ~ 29628787 (-)
G494506 NA non-coding downstream 6793 29627978 ~ 29628335 (-)
G494505 NA non-coding downstream 8425 29626492 ~ 29626703 (-)
G494504 NA non-coding downstream 9412 29625460 ~ 29625716 (-)
G494516 NA non-coding upstream 799 29636281 ~ 29636526 (-)
G494517 NA non-coding upstream 1154 29636636 ~ 29636966 (-)
G494530 NA non-coding upstream 22867 29658349 ~ 29658624 (-)
G494537 NA non-coding upstream 31800 29667282 ~ 29667537 (-)
G494389 LOC106585296 other downstream 219814 29411215 ~ 29415314 (-)
LOC110525655 LOC106585601 other downstream 1799826 27827231 ~ 27885634 (-)
LOC110525653 NA other downstream 1898150 27734995 ~ 27737024 (-)
G494542 NA other upstream 39841 29675323 ~ 29675573 (-)
LOC110525714 LOC106585251 other upstream 891204 30526034 ~ 30527686 (-)
G495554 NA other upstream 909920 30545402 ~ 30549450 (-)
G495560 NA other upstream 939636 30575118 ~ 30575573 (-)
G496772 NA other upstream 2025911 31661393 ~ 31661618 (-)

Expression



Co-expression Network