G494702



Basic Information


Item Value
gene id G494702
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 29960144 ~ 29960726 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU562037
CAAGTGGTCAACACTGTTCTGATTGGACCAGACCGTACCCTGATCTTGACGTGGGTTCTCTTCCTGAGCCACTTCTCCCGAGGTTTGGATGGAGTGAATTCTGACACCTCCTTACCATCCAGCTCCAGTATGCTGGAGTTTTCATGCCTCATCACCTAAAAGAAACATATAGATGACCCCATACCTACTCATCATGCCTAGACTAGTGTAAAGGGGGCGAGAAGCACAGGTCAAGGCTGTTTGGGGGGCGAGTTTACCTGTCGCAGCAGGAAGGACACTACATCCGTGGACTCCCAGTAGGATGCATGGAAGAGGTGCGGTAGTGCCACCGTGGGGAAGGCTGTCAGGGCATCAGGGCAGTACAAGGCAAAGTCCATACGCTTGGTTCCCCACCAACGGGCTGCGACTGCACGGTGAGAGGGGGTACATGGGTAAGCGTGGGGTGGCATGGGGGCAGAGGGGCAAAAACATCCCAATACACACCCCTGGAAAGGTAAAAACATTAACCGTTTGAAGGAAGACTGCATTCATTCATAAACCACTATCAAAGCCCAGATAGTCCACAGCAGTTCCTCAGCTAGAA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU562037 True 583 lncRNA 0.52 1 29960144 29960726

Neighbor


gene id symbol gene type direction distance location
kmt5ab kmt5a coding downstream 89737 29863198 ~ 29870407 (-)
LOC118965073 NA coding downstream 148361 29798141 ~ 29811783 (-)
LOC110525697 rsrc2 coding downstream 173216 29769924 ~ 29786928 (-)
LOC110525696 LOC106585281 coding downstream 199772 29754902 ~ 29760372 (-)
LOC110525694 LOC106585282 coding downstream 205741 29706059 ~ 29754403 (-)
LOC118964857 NA coding upstream 9341 29970067 ~ 29974882 (-)
LOC110525703 LOC106585270 coding upstream 15432 29976158 ~ 29980778 (-)
LOC110525706 NA coding upstream 144639 30102891 ~ 30141156 (-)
LOC110525709 LOC106585264 coding upstream 228846 30189572 ~ 30191815 (-)
sftpbb LOC106585263 coding upstream 238868 30199594 ~ 30209590 (-)
G494701 NA non-coding downstream 323 29959613 ~ 29959821 (-)
G494700 LOC106585272 non-coding downstream 868 29958981 ~ 29959276 (-)
G494679 NA non-coding downstream 1940 29956552 ~ 29958204 (-)
G494699 NA non-coding downstream 6755 29953181 ~ 29953389 (-)
G494698 NA non-coding downstream 7368 29952550 ~ 29952776 (-)
G494703 NA non-coding upstream 257 29960983 ~ 29961361 (-)
G494672 LOC106585272 non-coding upstream 2065 29962791 ~ 29968300 (-)
G494671 NA non-coding upstream 13760 29974486 ~ 29980710 (-)
G494712 NA non-coding upstream 31161 29991887 ~ 29992155 (-)
G494542 NA other downstream 284571 29675323 ~ 29675573 (-)
LOC110525684 LOC106585295 other downstream 456753 29502192 ~ 29520980 (-)
LOC110525681 hectd4 other downstream 476798 29411204 ~ 29483533 (-)
G494389 LOC106585296 other downstream 544830 29411215 ~ 29415314 (-)
LOC110525655 LOC106585601 other downstream 2124842 27827231 ~ 27885634 (-)
LOC110525714 LOC106585251 other upstream 565960 30526034 ~ 30527686 (-)
G495554 NA other upstream 584676 30545402 ~ 30549450 (-)
G495560 NA other upstream 614392 30575118 ~ 30575573 (-)
G496772 NA other upstream 1700667 31661393 ~ 31661618 (-)
G496777 NA other upstream 1710252 31670978 ~ 31671927 (-)

Expression



Co-expression Network