Gene
RNA
| Item | Value |
|---|---|
| gene id | G494929 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 30317286 ~ 30317535 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| putative uncharacterized protein DDB_G0282133 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU562304 | True | 250 | lncRNA | 0.30 | 1 | 30317286 | 30317535 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sftpbb | LOC106585263 | coding | downstream | 107696 | 30199594 ~ 30209590 (-) |
| LOC110525709 | LOC106585264 | coding | downstream | 125471 | 30189572 ~ 30191815 (-) |
| LOC110525706 | NA | coding | downstream | 209591 | 30102891 ~ 30141156 (-) |
| LOC110525703 | LOC106585270 | coding | downstream | 336508 | 29976158 ~ 29980778 (-) |
| LOC118964857 | NA | coding | downstream | 342404 | 29970067 ~ 29974882 (-) |
| LOC110525714 | LOC106585251 | coding | upstream | 208499 | 30526034 ~ 30527686 (-) |
| LOC110525715 | tco2 | coding | upstream | 219731 | 30537266 ~ 30553741 (-) |
| si:ch211-102c2.8 | LOC106585256 | coding | upstream | 243886 | 30561421 ~ 30579113 (-) |
| LOC110525719 | LOC106580333 | coding | upstream | 261943 | 30579478 ~ 30656421 (-) |
| LOC110525721 | LOC106584972 | coding | upstream | 345414 | 30662949 ~ 30686072 (-) |
| G494850 | NA | non-coding | downstream | 80034 | 30237051 ~ 30237252 (-) |
| G494841 | NA | non-coding | downstream | 86328 | 30230734 ~ 30230958 (-) |
| G494833 | NA | non-coding | downstream | 98771 | 30217934 ~ 30218515 (-) |
| G494826 | NA | non-coding | downstream | 121169 | 30192275 ~ 30196117 (-) |
| G494821 | NA | non-coding | downstream | 131766 | 30185304 ~ 30185520 (-) |
| G495447 | NA | non-coding | upstream | 8723 | 30326258 ~ 30327615 (-) |
| G495480 | NA | non-coding | upstream | 60710 | 30378245 ~ 30449990 (-) |
| G495504 | NA | non-coding | upstream | 110990 | 30428525 ~ 30444143 (-) |
| G495516 | NA | non-coding | upstream | 150882 | 30468417 ~ 30468639 (-) |
| G495518 | NA | non-coding | upstream | 151439 | 30468974 ~ 30469180 (-) |
| G494542 | NA | other | downstream | 641713 | 29675323 ~ 29675573 (-) |
| LOC110525684 | LOC106585295 | other | downstream | 813895 | 29502192 ~ 29520980 (-) |
| LOC110525681 | hectd4 | other | downstream | 833940 | 29411204 ~ 29483533 (-) |
| G494389 | LOC106585296 | other | downstream | 901972 | 29411215 ~ 29415314 (-) |
| LOC110525655 | LOC106585601 | other | downstream | 2481984 | 27827231 ~ 27885634 (-) |
| G495554 | NA | other | upstream | 227867 | 30545402 ~ 30549450 (-) |
| G495560 | NA | other | upstream | 257583 | 30575118 ~ 30575573 (-) |
| G496772 | NA | other | upstream | 1343858 | 31661393 ~ 31661618 (-) |
| G496777 | NA | other | upstream | 1353443 | 31670978 ~ 31671927 (-) |
