G495560


Basic Information

Item Value
gene id G495560
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 30575118 ~ 30575573 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU563022
AGGGGCTATGACCACCATTCAGAAGGAAAATGAAGTAGttgggcgctgtactgcagcgccagctgtgccatcagagtccctgggttcgcgcccaggctctgtcgtaaccggccgcgaccaggaggtccgtggggcgacgcacaattggcctagcgtcgcccgggttagggagggcttggtcggtaggggtgtccttgtctcatcgcgcaccagcgactcctgtggcgggctgggcgcagtgtacgctaaccaaggttgccaggtgcacggtgtttcctccggcgcattggtgcggctggcttccgggttggatgtgcgctgtgttaagaagcagtgcggcttggttgggttgtgtatcggaggacgcattactttcaaccttcgtctctcccgagcccgtacgggagttgtagcgatgagacaagatagtagctactacaacaactggataccacg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU563022 True 456 TUCP 0.60 1 30575118 30575573

Neighbor

gene id symbol gene type direction distance location
LOC110525715 tco2 coding downstream 21377 30537266 ~ 30553741 (-)
LOC110525714 LOC106585251 coding downstream 47432 30526034 ~ 30527686 (-)
LOC118965020 NA coding downstream 250172 30311060 ~ 30324946 (-)
sftpbb LOC106585263 coding downstream 365528 30199594 ~ 30209590 (-)
LOC110525709 LOC106585264 coding downstream 383303 30189572 ~ 30191815 (-)
LOC110525719 LOC106580333 coding upstream 3905 30579478 ~ 30656421 (-)
LOC110525721 LOC106584972 coding upstream 87376 30662949 ~ 30686072 (-)
LOC110525722 LOC106584973 coding upstream 119212 30694785 ~ 30748758 (-)
LOC110525723 LOC106584974 coding upstream 182836 30758409 ~ 30798593 (-)
LOC110525724 LOC106584976 coding upstream 227056 30802629 ~ 30820619 (-)
G495546 NA non-coding downstream 40521 30534352 ~ 30534597 (-)
G495543 NA non-coding downstream 43770 30531147 ~ 30531348 (-)
G495540 NA non-coding downstream 46547 30528274 ~ 30528571 (-)
G495505 LOC106585258 non-coding downstream 51737 30522006 ~ 30523381 (-)
G495502 NA non-coding downstream 56704 30501931 ~ 30518414 (-)
G495578 NA non-coding upstream 41440 30617013 ~ 30617233 (-)
G495581 NA non-coding upstream 50907 30626480 ~ 30626694 (-)
G495629 NA non-coding upstream 130725 30706298 ~ 30917821 (-)
G495554 NA other downstream 25668 30545402 ~ 30549450 (-)
G494542 NA other downstream 899545 29675323 ~ 29675573 (-)
LOC110525684 LOC106585295 other downstream 1071727 29502192 ~ 29520980 (-)
LOC110525681 hectd4 other downstream 1091772 29411204 ~ 29483533 (-)
G496772 NA other upstream 1085820 31661393 ~ 31661618 (-)
G496777 NA other upstream 1095405 31670978 ~ 31671927 (-)
G496851 NA other upstream 1267890 31843463 ~ 31892649 (-)
LOC110525784 LOC106585031 other upstream 2104469 32680037 ~ 32682899 (-)
G498484 rpl6 other upstream 2751934 33327507 ~ 33330504 (-)

Expression


Co-expression Network