XLOC_025351


Basic Information

Item Value
gene id XLOC_025351
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 25308710 ~ 25308964 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052339
TAATATGTGTCTGCTCCAGACTAATAAATCAACTTGTAGCAAAACAGTTGTGAAATATAAACAAGCGGATACATTTTTAATTGATGTGAACATGATGTATCGCTCGGAAAACCACAAAGATTGCACTAAACATCTAAACCCGAATCTGCTAAATGAAATTCAGTTTACAGAGcaacattttaaatcattatctATTATGatcaacatttttaaataggAGAAGATGATGTTTAAACCTCTATCTGACTAATCACA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052339 True 255 lncRNA 0.31 1 25308710 25308964

Neighbor

gene id symbol gene type direction distance location
XLOC_025350 c1qtnf6a coding upstream 86048 25216790 ~ 25222662 (+)
XLOC_025349 il2rb coding upstream 99704 25191366 ~ 25209006 (+)
XLOC_025348 TST coding upstream 138879 25166805 ~ 25169831 (+)
XLOC_025347 si:ch211-256m1.8 coding upstream 143521 25154078 ~ 25165189 (+)
XLOC_025346 napsa coding upstream 175466 25121156 ~ 25133244 (+)
XLOC_025352 mchr1b coding downstream 194478 25503442 ~ 25512817 (+)
XLOC_025353 NA coding downstream 263814 25572778 ~ 25573533 (+)
XLOC_025354 NA coding downstream 294704 25603668 ~ 25624618 (+)
XLOC_025355 NA coding downstream 336267 25645231 ~ 25648375 (+)
XLOC_025356 NA coding downstream 391627 25700591 ~ 25720214 (+)
XLOC_025429 BX649540.1 misc downstream 4939775 30248739 ~ 30249036 (+)
XLOC_025344 CR936416.1 non-coding upstream 248590 25055976 ~ 25060120 (+)
XLOC_025342 NA non-coding upstream 372455 24930580 ~ 24936255 (+)
XLOC_025327 NA non-coding upstream 856697 24438597 ~ 24452013 (+)
XLOC_025323 NA non-coding upstream 1091199 24217188 ~ 24217511 (+)
XLOC_025319 CR790362.1 non-coding upstream 1124284 24161869 ~ 24184426 (+)
XLOC_025357 BX120006.2 non-coding downstream 436672 25745636 ~ 25746918 (+)

Expression


Co-expression Network