G613411 (LOC106582852)


Basic Information

Item Value
gene id G613411
gene name LOC106582852
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 45874965 ~ 45875700 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU698246
TTTTGATGCTGGGTTTCTTGGCAACGGGCCTGGCTGGGCTGCTCTCTTTGATGCTGGGTTTCTTGGCAATGGGCCTGGCTGGGCTACTCTCTTTGATGCTGGGTTTCTTGGCGATGGGCCTGGCTGGGCTGCTCTCTTTGATGCTGGGTTTCTTGGCGATGGGGCTGGCTGGGCTGCTCTCTTTGATGCTGGGTTTCTTGGCGATGGGCCCGGCTGGGCTGCTCTCTTTTATGCTGGGTTTCTTGGCAATGGGGCCAGCTGGGCTGCTCTCTTTTATGCTGGGTTTCTTGGCAATGGGGCCGGCTGGGCTGCTCTCTTTAATGCTGGGTTTCTTGGCGATGGGCCCGGCTAGGCTGCTCTCTTTGATGCTGGGTTTCTTGGCTATAGGCCCGGCTAGGCTGATCTCTTTCCCtttttctttctcctcctcttgctCTGGCTTTTCTGCTTGGTCATTTTCCGGCTTCTCCTTATTGCTCTCGTCTTTATCCAGGGGAGGTTCTTCTTCTACTTCTGGCTTCACTCTCTCCAGAAGCTCTCCCTCGGGGTGCTCCCCCTCCCCGTCCAAGAGCTCCCCGTCCGGGCCATGCTCCCTCTCaggcctctccttcctctccttcttggGCGGGGGAGGCATCGCGTACTGTTGTGCCACCTGCTGGGCCACCAGCTGGGAGTTGATCCTGGGTTT

Function

NR:

description
RING1 and YY1-binding protein B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU698246 True 691 TUCP 0.58 2 45874965 45875700

Neighbor

gene id symbol gene type direction distance location
LOC110527871 LOC106582850 coding downstream 124128 45734357 ~ 45750837 (-)
ppp4r2b LOC106582851 coding downstream 143451 45725312 ~ 45731514 (-)
chl1b LOC100380675 coding downstream 561988 45236873 ~ 45312977 (-)
LOC110527866 LOC106582846 coding downstream 703559 45085520 ~ 45171406 (-)
cntn4 LOC106582845 coding downstream 893314 44803009 ~ 44981651 (-)
gpr27 LOC106582853 coding upstream 93730 45969430 ~ 45972012 (-)
LOC110528957 LOC106565741 coding upstream 441829 46317529 ~ 46333627 (-)
LOC110527878 LOC106582858 coding upstream 466288 46341988 ~ 46374962 (-)
praf3 praf3 coding upstream 581315 46457015 ~ 46460324 (-)
LOC110527887 LOC106582866 coding upstream 1169618 47045318 ~ 47141560 (-)
G613307 NA non-coding downstream 169161 45705586 ~ 45705804 (-)
G612915 NA non-coding downstream 364539 45510157 ~ 45510426 (-)
G612891 NA non-coding downstream 385779 45485492 ~ 45489186 (-)
G612743 NA non-coding downstream 478468 45396039 ~ 45396497 (-)
G612731 NA non-coding downstream 485579 45389122 ~ 45389386 (-)
G613820 NA non-coding upstream 250160 46125860 ~ 46129320 (-)
G613821 NA non-coding upstream 254659 46130359 ~ 46139862 (-)
G613880 LOC106582854 non-coding upstream 322142 46197842 ~ 46198275 (-)
G613881 NA non-coding upstream 329321 46205021 ~ 46209544 (-)
G613911 NA non-coding upstream 374213 46249913 ~ 46250150 (-)
G611674 NA other downstream 1389213 44484855 ~ 44485752 (-)
G610570 LOC106582807 other downstream 2295001 43579093 ~ 43579964 (-)
LOC110527816 LOC106582802 other downstream 2338000 43526691 ~ 43537037 (-)
LOC110527812 LOC106582796 other downstream 2436052 43435578 ~ 43439076 (-)
G610183 NA other downstream 2707645 43127811 ~ 43167320 (-)
LOC110527888 LOC106582868 other upstream 1392623 47260325 ~ 47284791 (-)
G616880 NA other upstream 2611347 48487047 ~ 48529168 (-)
G617624 LOC106582928 other upstream 3308724 49184424 ~ 49186096 (-)
G617632 NA other upstream 3319904 49195604 ~ 49195970 (-)
mustn1b mstn1 other upstream 3419555 49295040 ~ 49297305 (-)

Expression


Co-expression Network