G619733


Basic Information

Item Value
gene id G619733
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 50956271 ~ 50958540 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU705034
gggacaggtacaggatggcagcaactgcccgagttacaccaggaatgcacaatccctccatcagtgctcagactgtcctccataggctgagagaggctggactgagggcttgtaggcctgttgtaaggcaggtcctcaccagacaccaccggcaacaacgttgcctgtgggcacaaacccaccattgctggaccagacaggactggcaaaaagtgctgttcactgacgagtcgtggttttgtctcaccaggggtgatggtcagattcacgtttatcgttgacagaatgagtgttacaccgaggcctgtacttggaatcaatttggaggtggagggtccatcatggtctgggacggtgtgtcacagcatcatcggactgagcttgttgtcattgcaggcaatctcaacgctgtgtgttacagggaagacatcctcctccctcatgtagtacccttcctacaggctcatcctgacatgaccctccagcatgacaatgccaccagccagactgctcgttctgtgtgtgatttcctgcaagacaggaatgtcagtgttctgacaTGGCCAGCgaggagcccggatctcaatcccattgagcacgtctgggacctgttggatcggagggtgagggctagggccattcccccccagaaatgttccggaacttgcaggtgccttggtggaagagtggggtaacatctcacagcaggaacggacaaatctggtgcagtccacgaggaggagatgcactgcagtacttaatgcagctggtggccacaccagatactgattgttacttttgattttgaccccccctttgttcagggacacatttaatttctgtttgtcacatgtctgtggaacttgttcagtttacgtctcagctgttgaatcttatgttcatacaaatatctaCACATGTtacatttgctgaaaataaatgcagttgacagtgagaggacgtttctttttttgctgagtttataaattGTTACATAAATATAAGACATAATATAATGTTCAACTAATCCCTTTATTTTAACACCTGAGAATACATATACAATCTGGATCATCAGATATTCACAATCAGACTAAAGTTTCAATCCCTTTTCACTGGAGGATATTATTTGGACAATAAAACATTTAACGTTAACAGTTAACATTTTTTACTTCATTAAATCTAAACTAATATGATTCCAAAGATAAATTCAGAATGGCTATCGGTTACAACGGTGTGGAATTCCCTTTTAGCGAAAGGTTGGATGGAACCATGACAAAGTAAGAGTTGCACCGTCATGAAAATGTCCTGCTGATATTCTCAAGGCATCATTTATAAGGCAAATGTAGCAAATATGGCTTTGTCCTCTGAATCTATCTCAGGTACCAATGTCCATCCACCCCGCCAAACCCTGTCAAACAAATAAATACACACGAGAATAACCTCATATGTGTACAGTAAGGTGATATACTAAACTTCCTTACAACATCACAGTCACTTACGTTATTCATTTTGGGATATGTATCTTATCATGTCAAAAGAATCATACaaattattatagttattattatttGTCATTCACTTTCTATAAAAgtcttataaaaaaaaatctaatgaaGGGCATTGGTTGCAAACAGTATATAAGATAAAGAAAACACACATTCAAACAGAAAGTACCCTGATATTGTCAAAACACTTACATCAGACAGCAGAAAAATGGACTAACTGTTGAAAGGCAATAAGATAAAGGCTGAGAAAAAAGCTACGTTGTTTGAGTGGAGGTACAGTAAGCAGTTCTTAGAGGCAGCATTTGGACACCTACACCTTTAAGACATCAACCAATCTCTATGGAGCACTGGTGTTGTTATAGGCCTGAGGTAAACTCTGCTTGATTCATGTAGTTATAGCCATGGGAATACGGCCTCTTTCTCAAAACTAAGGAATAACGGCTATTCCCTGTCACAACACCTGAGAGACCCAGAACAAACAAAAGGTGAGTCTTTCTGATGCTTTGAAGCACATCTCTCTGGATCTATCAGCCTGCAagcctttcctccctctcctcctctagctgtgtctctgCTCTGACCTTAAAGCCCCCGGGGCCACTCCACTGTCTATTCCCCTGACACACTCCCTCTGGGTAGGTGACACCTTGTACTTCCACGGATAAGTATGAAATGTTAAGGTTCTGCATCACAACTTTCATGTCATTCACTTTTCTCTCTCAGCAAAAATATTCAAGTATGTCCCACCAAGGcaggggttctctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU705034 True 2270 TUCP 0.43 1 50956271 50958540

Neighbor

gene id symbol gene type direction distance location
LOC118965294 NA coding downstream 16307 50937209 ~ 50939964 (-)
LOC110528963 NA coding downstream 415686 50509424 ~ 50540585 (-)
LOC110527964 LOC106583033 coding downstream 649993 50300364 ~ 50306278 (-)
LOC110527963 LOC106583034 coding downstream 656134 50279611 ~ 50300137 (-)
LOC110527961 LOC106565835 coding downstream 1019696 49660022 ~ 49936575 (-)
LOC118965295 NA coding upstream 128749 51087289 ~ 51091164 (-)
LOC110527971 LOC106583024 coding upstream 138917 51097457 ~ 51152020 (-)
LOC110527973 synpr coding upstream 220663 51179203 ~ 51207209 (-)
ptprga LOC106583020 coding upstream 490491 51449031 ~ 51726478 (-)
LOC118965403 NA coding upstream 1495299 52453839 ~ 52453893 (-)
G619732 NA non-coding downstream 74 50955464 ~ 50956197 (-)
G619688 NA non-coding downstream 62455 50887023 ~ 50893816 (-)
G619602 NA non-coding downstream 103478 50852492 ~ 50852793 (-)
G619584 NA non-coding downstream 116742 50839292 ~ 50839529 (-)
G619478 LOC106583030 non-coding downstream 157674 50705082 ~ 50798597 (-)
G619833 NA non-coding upstream 39033 50997573 ~ 51037061 (-)
G619876 NA non-coding upstream 119346 51077886 ~ 51079089 (-)
G620130 NA non-coding upstream 291816 51250356 ~ 51250574 (-)
G620236 fezf2 non-coding upstream 472906 51431446 ~ 51432983 (-)
G620237 NA non-coding upstream 474802 51433342 ~ 51433733 (-)
mustn1b mstn1 other downstream 1659023 49295040 ~ 49297305 (-)
G617632 NA other downstream 1760301 49195604 ~ 49195970 (-)
G617624 LOC106582928 other downstream 1770175 49184424 ~ 49186096 (-)
G622985 NA other upstream 2346996 53305536 ~ 53322831 (-)
G625426 NA other upstream 4113939 55072479 ~ 55075396 (-)
G625472 LOC106582968 other upstream 4205952 55164492 ~ 55188756 (-)
LOC110528020 LOC106582955 other upstream 4474916 55420466 ~ 55566988 (-)
G627254 NA other upstream 5732783 56691323 ~ 56696091 (-)

Expression


Co-expression Network