G622985


Basic Information

Item Value
gene id G622985
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 53305536 ~ 53322831 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU708601
ttctgttatttttgtattgattcagtgttcagtgctttctttaattaaaattatgaacatttaccacgctgcggttcggtcctcctctctttctctagacGACATTCGTTACACATATTTACACGTGTCTCAAAGAATGAGAAAAGGCAGTTATCATGACAATTATTTGATCTCTTAAATCACACAATACACACTATCAAATATAAGTACAAAACCTCTAAGTAAATAAGATTGACGTTATTTTGTGACATTTGGGACTGCAGGAAAATAACATGAAGAGCTGGTTTCCTGTGAGCCACGATCAGTAAGCACACATTTACAAATGGTCAGTGATTATCAGCCTGGGGATTTCCTcaatcatacattttttttagtgCACTAATCTCATTACAGGGGCTTCTGCCCACACAACAGAGCAAGCTAGCAACCTGTAGTCAAATATGGCAGTTGAAAAGACAATTAcgtatatttcagttttgtatataAATAGAACATTGGGTTAAAACATTTCCGCTGAACTGACTTTCAAAAACAACTTAATAAAAGAGGAACAATCCGCTGGCACTACTTTTCAAGGCTACAGATGCAGACTAGCAGATAGGTGCAGTCCTAGCCCTGGAAAGAAATGAGACATTTTAGACAAAGCATTAACTCAGCGGAGCAGTTTTAACAATAGTGTCACTATTTAGATTACTCAAGCTCAAAAGACTAACACAAACCGTATAGTCATATGAGTGAGACTTTGGTTAAAAGATGGTGAACATATTTTTGAATAATGGTTTTAATATAATGATATGTATGAACTGTAGGTACCTTGGGTAGGCATTCAACTTAGTTATTTTGAAATTGTAATAATTCCTCTGTTCGACTTCGGTCTTCTCCAAACTGGTACGAGCTATGTATCATTTTCAAACAATGACAGTTTGTCAGGATTACCATGTTTACATATAATAGTGCAGTAAAGAAATATATTCTGCATGCCAATCTCAGTATTTTAGCAGTGTTTTAGTTGGGTAGTttgtgtgttccagtgtggtAGGCAGTTAGAAAGCTGGTCAGCTCAGCACTGTGTATAGCCTAgcctactaccccacctcccttTAGAACAACATACTCTATTCTCTTTTTCAAAGCCAATATCTGTCCGAGAGTGCCTTTGCAAAGGATTTCCTTACTACCTTGATTTTTCAACACACTGCAGGAAAAATGTAATTTTTTGGCCAAAACAGGGAAAAGTAACCAGCAAAAAGTTTGATCATGCAAATCACAGATACTGTagggaataaataaatacagtataaatGCCCATGGCCAGACTGAATGTTAGTTGATGGGTTATGTAAATAAAGTTTTGTTAACAAATATTGTTTAGGTCAATTAATTGGCCAACCGTATAGCTAGTTTATCCAAATAATTGTTTGATTTAAAGCCAGAAGCTGTGGTTAATGCACATACAGTATAGTTAGTAAGAGGAAAATATAATCTTTGATTTAGTTGTAGGTAAAATCGTGCTTAATCATGGACTATTTTCGAAAAAGATAAATTATTAAATGTAGGTTCTCACCCTTTCCTCTTCCAATACCGTGTGATCAGAACAATAAGTGTAACTTATGACAGTGCCGATCCCACTTCCCACAACTGCTGCAATCTCAGTAGCTGCATTGGTGTCATGTTCCCCAATGCCATTATTCCTCCCTGAAACTCGTATTGTGGGTGGAACAGTcgatgttgttgttattgatgatGTTGATATAGTTGTTGGTTTCAAAAGAATGTCATTGACATCTTGTATTGTGGGTGGAACAGTcgatgttgttgttattgatgatGTTGATATAGTTGTTGGTTTCAAAAGAATGTCATTGACATCTTGTATTGTGGGTGGAACAGTcgatgttgttgttattgatgatGTTGATATAGTTGTTGGTTTCAAAAGAATGTCATTGACATCTTTACATTCAGGAGGTAATGAGTTGTATTCACCATCTTCAATACACTCAATTGATTTGTTTCCAATGAGGGTGTAACCTTCATTACAGGAGTACTGTATGACACCACCATACTCTGGTAACTCTTCGCCAGGCTTCTCTATGATCGTGCCATGCATTATCTCAGGAGGTTTATCACAAGTTACCACTTTACATCTTGGTCTTCCACTCCAACCTATGGCATAACACTGCCTGTAACTTGGGCCCATAAGTTGATAaCCTTTATCACAGATTGCTCTTGCTGATGCACCAAAAAGTGTGCCTTCCTTAAACTCATATGTCAAATGTGGCATCTTCCTGGGGGCACCACAGTCCTTCTTTTTGCAGGTTAATTTGAGCGTGCTCCACTTTCCACTTGTGCAGGTGATTCTTTCAGATCCTTGCTCTTTCAAGTAGCCGTTGGCACACTCAAAAGTGGCTTCCCCTCCCTCCGGAAAATCGTTCATTAATAGCGCATCAGTCGTTAGAACAACATTTCCCTCTACTTGAGGTTTGGGACACTCGGCATTTCCACTTGTTAAAAAGATAAGGCATATCAAGCACTTAGTCCATGCCTTTGAATAAAACATTATACTGGCTGTCCTTTTTAAAGTTGATTTTATGTGAAGACAAGTCGGTCTCTCGATCTAACAAGTTCTCTCTGATCTTGTTGGCACTATCTAGCTGGCTGTTTAATCAGTACCAACCAGTCCATGGACAACTTCAACTGTCGCTT

Function

NR:

description
complement decay-accelerating factor-like isoform X19

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU708601 True 2706 TUCP 0.38 13 53305536 53322831

Neighbor

gene id symbol gene type direction distance location
pad LOC106583007 coding downstream 199672 53090437 ~ 53105864 (-)
LOC110527983 LOC106583010 coding downstream 463767 52785667 ~ 52841769 (-)
gnl3 LOC106583012 coding downstream 608693 52691341 ~ 52696843 (-)
LOC118965418 NA coding downstream 611060 52694402 ~ 52694476 (-)
LOC118965422 NA coding downstream 611517 52693944 ~ 52694019 (-)
LOC118965299 NA coding upstream 46803 53368443 ~ 53373429 (-)
LOC101268938 cd34 coding upstream 57670 53380501 ~ 53400793 (-)
LOC110527988 plxna2 coding upstream 107116 53429947 ~ 53486228 (-)
LOC118965356 NA coding upstream 204017 53526848 ~ 53530100 (-)
kif17 kif17 coding upstream 267007 53589838 ~ 53602153 (-)
G622874 LOC105006631 non-coding downstream 61694 53150477 ~ 53243842 (-)
G622534 NA non-coding downstream 159752 53145416 ~ 53145784 (-)
G622528 NA non-coding downstream 165173 53140072 ~ 53140363 (-)
G622517 NA non-coding downstream 168606 53134839 ~ 53136930 (-)
G622514 NA non-coding downstream 180145 53125159 ~ 53125391 (-)
G623013 NA non-coding upstream 83199 53406030 ~ 53411743 (-)
G623018 LOC106581772 non-coding upstream 90099 53412930 ~ 53413188 (-)
G623173 NA non-coding upstream 412217 53735048 ~ 53737808 (-)
G619733 NA other downstream 2346996 50956271 ~ 50958540 (-)
LOC110527964 LOC106583033 other downstream 2999380 50300364 ~ 50306278 (-)
LOC110527961 LOC106565835 other downstream 3369255 49660022 ~ 49936575 (-)
mustn1b mstn1 other downstream 4008288 49295040 ~ 49297305 (-)
G617632 NA other downstream 4109566 49195604 ~ 49195970 (-)
G625426 NA other upstream 1749648 55072479 ~ 55075396 (-)
G625472 LOC106582968 other upstream 1841661 55164492 ~ 55188756 (-)
LOC110528020 LOC106582955 other upstream 2110625 55420466 ~ 55566988 (-)
G627254 NA other upstream 3368492 56691323 ~ 56696091 (-)
G627314 NA other upstream 3511754 56834350 ~ 56835092 (-)

Expression


Co-expression Network