LOC118965504


Basic Information

Item Value
gene id LOC118965504
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 24404911 ~ 24411834 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052842.1
attaaGTGGAGTTGGTGTGTGGTCCAAATTATTGGTCTACGGGTCTCTTTTCCAatcttaaaatgataaacattagacattggccatgctgtcaatccagaatGATTTCTGCTGCGCTTAAAACAACTCAGAAGAGAGAAATCTGACAGTGAATTCAAGAAAACTGGTAACTCAGGAAAAAAAAAATTGCTCAGACtgtgaaaatacattttgaacggtcatcccaACTCGGAAGTGTAAATCGggaacttgggcctctttctagagctacgacctgaaaatcactgacgtcatcatgattcaactttGTCCTCGCCTCGCCATAGTTCCCAGTTGTCCCAGCACCATCAATCCAGAGAATGTCAGACTTGGATGAGTAAGTTTGCCCACAAAAGGACCGCCGCAcctccttcctgttcaagtgagcaaagcacaaggtgtctacagcctttagacgaagtttcacgcctttatgttgaagagtgAGCGTAAAGGACCACATTGcataagtggccagctgagggctctgaGTGATTCTTGCACAAaagacagagAAAACTTGGGGGCCAATTTGGCCCGCCTGCGGGGCCGCcagttggagagccctgatctaCACAATTCTTCTGGTCGATGGCTAGAAAGAATGTGGCCTCTGAAATGGTCGGGCACCCATTGAAATCAAATCGTCTAGGATGGCACGTGCTGTTGTTTGACAGATGAACCTTGAAACATGGAATCAGTCTAGAGATTTGGAACGTTGTAACCTGACCATAAGAGCTTGATAAATAAAACACTACAGAAATGCAAAGGTTGCAAATAACActcaaaatatactgaacaaaaatataaaacacagcatgtaaaaagtgttgatcccatgttttatgagctgaaataaaagattccagacctttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052842.1 True 916 mRNA 0.43 3 24404911 24411834

Neighbor

gene id symbol gene type direction distance location
ncoa1 LOC106571447 coding downstream 6974 24297942 ~ 24397937 (-)
LOC110529654 NA coding downstream 114802 24283391 ~ 24290109 (-)
LOC110529653 rcan2 coding downstream 161031 24125758 ~ 24243880 (-)
si:dkey-221h15.4 LOC106571445 coding downstream 449153 23952710 ~ 23955758 (-)
cpsaseii LOC106571444 coding downstream 452393 23928936 ~ 23952518 (-)
LOC110529659 LOC106571449 coding upstream 24663 24436497 ~ 24438647 (-)
LOC110529658 LOC106571450 coding upstream 27133 24438965 ~ 24446940 (-)
srp09 srp09 coding upstream 35759 24447416 ~ 24449348 (-)
LOC110529662 LOC106571455 coding upstream 327223 24739057 ~ 24795416 (-)
LOC110529665 LOC106571552 coding upstream 580701 24992535 ~ 25010299 (-)
G688338 rpl7l1 non-coding downstream 3770 24379303 ~ 24401141 (-)
G688192 NA non-coding downstream 286491 24118213 ~ 24118420 (-)
G688191 NA non-coding downstream 287126 24117540 ~ 24117785 (-)
G688167 NA non-coding downstream 288269 24084060 ~ 24116642 (-)
G688038 NA non-coding downstream 309981 23843168 ~ 24094930 (-)
G688369 NA non-coding upstream 18043 24429877 ~ 24434825 (-)
G688375 NA non-coding upstream 33987 24445821 ~ 24446118 (-)
G688446 NA non-coding upstream 150219 24562053 ~ 24586713 (-)
G688464 NA non-coding upstream 179501 24591335 ~ 24591789 (-)
G688109 NA other downstream 416057 23988099 ~ 23988854 (-)
G687979 LOC106571438 other downstream 648001 23754832 ~ 23756910 (-)
G687890 NA other downstream 767503 23635309 ~ 23637408 (-)
LOC110529643 LOC106571435 other downstream 783665 23614938 ~ 23659111 (-)
G685953 NA other downstream 2243869 22159030 ~ 22161042 (-)
G688366 NA other upstream 13229 24425063 ~ 24425553 (-)
G688480 LOC106571453 other upstream 217720 24629554 ~ 24631049 (-)
G688537 NA other upstream 269133 24680967 ~ 24681426 (-)
G688922 NA other upstream 324212 24736046 ~ 24737040 (-)

Expression


Co-expression Network