LOC110529724


Basic Information

Item Value
gene id LOC110529724
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 27287115 ~ 27308032 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002474431.2
TAAAGCAGGAATCGACAGATTGTGGGCGACCCTATGCCGCCCCACGTCTTGTGTAATGTTTTCACTTCGAACAAAAACAAGGGGATTAAATCCTGAGCCACCTTGGGCTGGCCTTCTGGGAAAGGTGTGTCTTTTGCGTTAAATCCTGCCTACTCGAATTACCCTGCTGCTATGGCCCCGGAGCTGGAGAGGAAGTGAAAGTAACTTGCAAGCTAATGTTACAGCTGCCAGAAACAAACACAGAGCAGATGAAGCCAACAAGCTAGCTAACTTGTTAACCAATAAACTGTCCTTGTAGCAGGGAAAACAGAAGCAATAATCATTCTTGGTTCTTGGATCTGAATCAACTCAACCCCAAAAGAAAAAAAGCGAGCAAAAGACTGCTCATGACCAATCCATCAACCGGATAAACATTGGAATTAATTTTGAAAGGTGGAAGAGTGAATCCAAAATGGTCATCGTTCTCATGGACTTGTAGGGAGATACTGGTGGAGACAGTCTGATTTCGAGGGAACCTGAGGTTGTAGAAAATCAACACCAAAAGAGAGTCTCTGTTTTCTAGCCCTCCCGGTTCTGAcctgttctgcctgccctgacactgagcaCGCCttcctgaccattcagcctgccctgacctctaGCCTGCCTGCCCCCTGTACCtcttggactctgacctggttaatGAACTTCTGCCTGTTCTCGACCTGcctattgcctgccccttgtattctaataaatatcagagactctaactatctgcctcctgtgtctgcatctgggtctcaccctgTGTTGTTAAACAATTTGGTTTCGGGAGATAAGTCACTGCCAATAAACGTTAATGTTAGCATTTTTGGTAGAAATACATTACTTAACTCAGCATAGTATGTCTAAAGttgtgtaacacttttacaacagtCTGGCACTTTTGTAATAAAATTGTCAATATATTGTCTTAAACATCTTCTGTATTGTGTGCTTATTGTTTAACCATTCATACAGTATGTTCTAgggcagtggttctcaaacttttttggttactgtaccagcaactgaattttgctctgcctggagtaccgcctcatgtgcattttaccagtaagccTATGATCTCATGAGTCTTCTAAAGTaccccctggttgggaaccactgttctagGGGACATTAAGACCTTAACCCCTGTTGGTATAAGTCCTTAAATCGCAATATCTACTAAACTAACATATGGAATTATTTTAAGATGATAATAAAACATGTAATTTAGCCATTTGATTTACATttttaggacccctgtaggtataaaaaaaaaataaacaaatgatttgctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002474431.2 True 1328 mRNA 0.42 3 27287115 27308032

Neighbor

gene id symbol gene type direction distance location
esr2a erb1 coding downstream 2624 27244559 ~ 27284491 (-)
LOC110529723 NA coding downstream 100256 27170938 ~ 27186859 (-)
LOC110529714 LOC106571503 coding downstream 684181 26599030 ~ 26602934 (-)
LOC110529713 l3hypdh coding downstream 690377 26591530 ~ 26596738 (-)
LOC110529710 LOC106571501 coding downstream 823754 26444117 ~ 26463361 (-)
LOC110529221 NA coding upstream 306968 27615000 ~ 27616094 (-)
brf1b LOC106571710 coding upstream 516118 27824150 ~ 27951450 (-)
LOC110529732 LOC106571705 coding upstream 703765 28011797 ~ 28023925 (-)
ppp4r4 ppp4r4 coding upstream 742127 28050159 ~ 28177674 (-)
prima1 prima1 coding upstream 1018904 28326936 ~ 28388304 (-)
G691671 NA non-coding downstream 72815 27179184 ~ 27214300 (-)
G691520 NA non-coding downstream 289282 26995283 ~ 26997833 (-)
G691505 NA non-coding downstream 334569 26950717 ~ 26952546 (-)
G691479 NA non-coding downstream 377222 26908013 ~ 26909893 (-)
G691473 NA non-coding downstream 384429 26902457 ~ 26902686 (-)
G691749 NA non-coding upstream 11381 27319413 ~ 27319655 (-)
G691755 NA non-coding upstream 20786 27328818 ~ 27329410 (-)
G691807 NA non-coding upstream 100499 27408531 ~ 27410226 (-)
G691826 LOC106571713 non-coding upstream 169748 27477780 ~ 27483669 (-)
G692069 NA non-coding upstream 331543 27639575 ~ 27639774 (-)
G691447 LOC106571509 other downstream 419037 26864210 ~ 26868078 (-)
cenpw LOC106571497 other downstream 856272 26428702 ~ 26430888 (-)
G690073 NA other downstream 1295972 25990678 ~ 25991143 (-)
G690033 NA other downstream 1321622 25965179 ~ 25965493 (-)
LOC110529694 LOC106571481 other downstream 1481640 25801320 ~ 25805570 (-)
G691747 NA other upstream 7536 27315568 ~ 27315935 (-)
G692859 NA other upstream 807704 28115736 ~ 28116048 (-)
si:dkey-85n7.8 NA other upstream 1170785 28478817 ~ 28481944 (-)
G693383 btbd7 other upstream 1285309 28593341 ~ 28594431 (-)
G693665 NA other upstream 1650363 28958395 ~ 28958832 (-)

Expression


Co-expression Network