ahsa1a (LOC106571686)


Basic Information

Item Value
gene id ahsa1a
gene name LOC106571686
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 28850874 ~ 28860111 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021612234.2
GCCTTTTTCAAATATCGCATGTTTTGTGGGATTCGATTATGCTGTTGTATACATTGCATAACCTGCACCTCCGTTTCTGTTCTTGTGAGGATGCTTATCGGCAGGTCGTTATCAAGTGAGGGGTTGAGAGAGGCTACAGCAGCATCTGAGCTGCACTGTCCCTAAGCCGAGGAACGCTCACCTACGTTCTCTTATGAGAACGAAACGTTCAACTACGTTTTTTTTATGAGATCGGAGTTGAGCGTTCCGTAGCTATCTCTACCCTAGACTCTTTCTGCgttttaaagatgcactatgcagaaacaGCTCCGCCATTtcttggttgctaaaattctcAAATTTAACCTCATTTCAGTTAAtctgacaaaacaagcaagtatagtgtagagaatcattgtactttCTAAACCGCTATGAAATATTTCCCatgaccaaaaatattgtattttcagctgtttgaagctggtgaacAATAACGTTACCAAAAGTAAAAGATACAAAAACGAAATCTAAGGAATGGAAGCAATAGAAATActgcacatagaacatatctactgcttcttagactttctTTCAATGAGAGTGAAAGATCTGTAACTCATATTTCTGTGTGAATTTGGTGGACGACCCATTTACCTATAGTCTACGTCAGTATTAGTCGTAATACATAAAACTTAGCGGACAAACacagaaatggttccaatcgtttttccaccgtTCGTTTGAGCCATTGTGGATTTTAGAAACGCTTCAATTAAGGGCTGTGTTTTCATGTAGGTTTACCCTGCCGGTACGTTTTTGATAACTATGCTAATTAGCTGCCAATGCGGATATCATCTAGAACTACAAATGCCTGTCTCAAGCTTAACGACACTCACCAGGGCCTTGAAGATCTGGACGATACTGCCAAattgaggcaaagGACCGAACGAGATGTGACCGGCTGGTCAACAGACAAGCTGAAGGAGCTTCTATTGGGACTGCGCGTGGAGGGCCCAGAGGGGAGCTGCGAGGTCACTGACATCCCCAATCTGGACGGTGAGGCATCCATCAACAACCGCAAGGGGAAGCTCATCTACTTCTACGAGTGGAACGTCAAGGCGACATGGACTGGAACATCAAAAACCGGAATCAAGTACAAAGGGAACATCGAAGTTCCCAACCTCTCTGATGAAAATGACATGGACGACCTAGATATCAGTGTGTCACTTTGCAAAGATGAACCCAACACAACCCTCACTGAACTCATGAAGAAGGAGGGAGCGAAGAAAGTGCGTGCTGCCCTGGGGAGCTATGTGGACCACCTCAAATCCGAGTTCACTCAGGGCATGATCCTCCCAACGGCGAATGGAGTGGCGAGCAAGCCACAGCCAACGCAGACAAAGGTCAAAGTGGACAAAACCCAGATTGGCTCCTCCGTATCAGCCCCCTCTCCTAGCACAGGGGTCAAGATCCCCACCTGCAAGTTTAGTCTCCAGGAGACCTTCCTCACCTCACCTGACGAGCTGTACAGAACCTTCATCAACCAGGACATGGTCCAGGCGTTCACCCATACTGCAGCAGTGGTCGACGGAGACAAAGGAGGGAAGTTTCAGCTGCTAGAGGGAAGCGTCAATGGAGAGTTTCTGGAGCTGGTCCCAGATGAAAAGATAGTTATGAAATGGAGGTTcaagacctggccatgtgAGCACTATGCAACTATTACCCTGAACATGAAGGATCGAGGCAATGAGACTGAGCTGAAGGTAGAATTTAAAGGAGTCCCGACGGTAGAGGAGGATCGGACAAAGGAGGGTTGGAAGAGACACTACTTTGAAGCCATCAAACAGACTTTTGGATTCGGGGCCCGACTCTACtgaataatgtaaaaaaaaaaaaaagaacctgATTATTTAATGTGGATGAATACTCTTTAGTGCAGTCTCTTGTAGCACCAGCCCTACATCGTGCGTAGACAAACGGTGCCTTTTCCACTTGGAAGACTGGCAGTCCGTGTAAGGGTCATTGGTTCAAGGCTTTCTTTGATGTCTGTGCTTACTTTACTGAGTCTATAGGCAAAATGAGATGTAGAAACAATTACTCGATCGACAGTATATTTGGAATTAACTATTAGCAATCTCCAATTCTGCACATTTGAAGTGTGTCATGCTGAAATAAATTACATTTTTACTGAGTTA
>XM_021612235.2
CAGTCATTTCTAGTCCGCTTCTAGTAATTTCTACGGCGAGTGCGCAAGCTCCTTGCATTTCAAAACGAGTTTTCGAGAAAAACCAGGGTCCTAAAACCAAGCACACCGGCGCTCAGGTACATTTCTACGGCCATAACGCAGTTTTAGATAGATGAAATACAAAGGATTTACAGTCGGTTTAGCTGAAGTTAATGTTTTGGTTAGCGATTAATTGAATTTGTCAGTTAAAAATACATACATAGTAGCTACACTTTGCCATCTAGGTTGATATTACCAACGTTAGCCTGTGGCTAGCTGTGTAGCTAACGTAGCTTTTCGTCACGTTTCATCCTTTTTGGTTATAGGCATTTGTAATTCAtttaactagctagttagctgacgTTAGCCAGCTTTAGGAAATCATTTTGAACAGTTTTTTGTTTGGTAGTAGCTAGCAAATAAcattagctactgtagctaaccCATTAACTAGACACCGCTGTCATCATGGCGAAATGGGGAGAAGGGGATCCACGCTGGATCGTGGAGGAGAGAGCCGATGCAACAAACGTCAATAACTGGCATTGGACCGAACGAGATGTGACCGGCTGGTCAACAGACAAGCTGAAGGAGCTTCTATTGGGACTGCGCGTGGAGGGCCCAGAGGGGAGCTGCGAGGTCACTGACATCCCCAATCTGGACGGTGAGGCATCCATCAACAACCGCAAGGGGAAGCTCATCTACTTCTACGAGTGGAACGTCAAGGCGACATGGACTGGAACATCAAAAACCGGAATCAAGTACAAAGGGAACATCGAAGTTCCCAACCTCTCTGATGAAAATGACATGGACGACCTAGATATCAGTGTGTCACTTTGCAAAGATGAACCCAACACAACCCTCACTGAACTCATGAAGAAGGAGGGAGCGAAGAAAGTGCGTGCTGCCCTGGGGAGCTATGTGGACCACCTCAAATCCGAGTTCACTCAGGGCATGATCCTCCCAACGGCGAATGGAGTGGCGAGCAAGCCACAGCCAACGCAGACAAAGGTCAAAGTGGACAAAACCCAGATTGGCTCCTCCGTATCAGCCCCCTCTCCTAGCACAGGGGTCAAGATCCCCACCTGCAAGTTTAGTCTCCAGGAGACCTTCCTCACCTCACCTGACGAGCTGTACAGAACCTTCATCAACCAGGACATGGTCCAGGCGTTCACCCATACTGCAGCAGTGGTCGACGGAGACAAAGGAGGGAAGTTTCAGCTGCTAGAGGGAAGCGTCAATGGAGAGTTTCTGGAGCTGGTCCCAGATGAAAAGATAGTTATGAAATGGAGGTTcaagacctggccatgtgAGCACTATGCAACTATTACCCTGAACATGAAGGATCGAGGCAATGAGACTGAGCTGAAGGTAGAATTTAAAGGAGTCCCGACGGTAGAGGAGGATCGGACAAAGGAGGGTTGGAAGAGACACTACTTTGAAGCCATCAAACAGACTTTTGGATTCGGGGCCCGACTCTACtgaataatgtaaaaaaaaaaaaaagaacctgATTATTTAATGTGGATGAATACTCTTTAGTGCAGTCTCTTGTAGCACCAGCCCTACATCGTGCGTAGACAAACGGTGCCTTTTCCACTTGGAAGACTGGCAGTCCGTGTAAGGGTCATTGGTTCAAGGCTTTCTTTGATGTCTGTGCTTACTTTACTGAGTCTATAGGCAAAATGAGATGTAGAAACAATTACTCGATCGACAGTATATTTGGAATTAACTATTAGCAATCTCCAATTCTGCACATTTGAAGTGTGTCATGCTGAAATAAATTACATTTTTACTGAGTTA

Function

NR:

description
activator of 90 kDa heat shock protein ATPase homolog 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021612234.2 False 2177 mRNA 0.45 9 28850874 28859472
XM_021612235.2 True 1821 mRNA 0.46 9 28850874 28860111

Neighbor

gene id symbol gene type direction distance location
LOC110529750 LOC106571688 coding downstream 6047 28822703 ~ 28844827 (-)
si:dkey-177p2.18 LOC106571734 coding downstream 46517 28776437 ~ 28804357 (-)
LOC110529748 NA coding downstream 84201 28736794 ~ 28766673 (-)
chga chga coding downstream 122963 28704849 ~ 28727911 (-)
tmem251 tmem251 coding downstream 215189 28625412 ~ 28635685 (-)
LOC110529757 LOC106571682 coding upstream 130146 28990257 ~ 29005160 (-)
lcb2 lcb2 coding upstream 165172 29025283 ~ 29029716 (-)
LOC110529223 snw1 coding upstream 186312 29046423 ~ 29096035 (-)
LOC118965622 NA coding upstream 342275 29202386 ~ 29203480 (-)
LOC118965623 NA coding upstream 344039 29204150 ~ 29208928 (-)
G693488 NA non-coding downstream 65358 28785109 ~ 28785516 (-)
G693471 NA non-coding downstream 80662 28770001 ~ 28770212 (-)
G693468 NA non-coding downstream 82718 28767751 ~ 28768156 (-)
G693390 itpk1 non-coding downstream 184940 28634023 ~ 28665934 (-)
G693085 NA non-coding downstream 385036 28465620 ~ 28465838 (-)
G693517 vipas39 non-coding upstream 13207 28873318 ~ 28876113 (-)
G693527 NA non-coding upstream 22192 28882303 ~ 28882931 (-)
G693528 NA non-coding upstream 23513 28883624 ~ 28884010 (-)
G693530 NA non-coding upstream 26323 28886434 ~ 28886754 (-)
G693652 NA non-coding upstream 81751 28941862 ~ 28942115 (-)
G693383 btbd7 other downstream 256443 28593341 ~ 28594431 (-)
si:dkey-85n7.8 NA other downstream 368976 28478817 ~ 28481944 (-)
G692859 NA other downstream 734826 28115736 ~ 28116048 (-)
G691747 NA other downstream 1534939 27315568 ~ 27315935 (-)
G691447 LOC106571509 other downstream 1982796 26864210 ~ 26868078 (-)
G693665 NA other upstream 98284 28958395 ~ 28958832 (-)
G694858 LOC105017690 other upstream 1141652 30001763 ~ 30062168 (-)
G696068 NA other upstream 1986791 30846902 ~ 30847209 (-)
G696073 NA other upstream 1994996 30855107 ~ 30855407 (-)
G696499 NA other upstream 2617243 31477354 ~ 31478027 (-)

Expression


Co-expression Network