LOC118965624


Basic Information

Item Value
gene id LOC118965624
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 29213787 ~ 29223764 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986866.1
ATGACGCACCTTCCCCCAGAGGAATGTCAACAAGATCTTGTCTTCCTGCAGGGAGTTGGACCACCCCTGGAGCACCTGTCCCAAAAGGAGAACCAGGCGACGAAGCGACAGGCCGAGGAGCGCTCCTGCACCTTCCCAGACTATCCTGGTCCGCCACTGAGTCCTGCCCTAGTCGACTCAGGTGCTGTAGTCAATTTTCTAGACCGTCCGGATCAGGCCATCCATGTCCCTATCCTGGAGGAATACCGGGACCTACAGGTGGCTTTTTCGAAGACTCGTGCCACATGCCTGCCTCCTCATTGCCCATGGGACTCCACTATCGACCTACTGCCTGGTTCTACCCTCCCGCGGGGGCACATCTACCCTCTCTCGCATGCAGAGACCGAAGCCATGGAGGTCTACGTCCAGGAGCAGAGGGTCCTTGCAGTACAGTCGTGGGAGGTCCTAGACAACTGTGCTGGACTGAGGAGGCCAACAAAGCTCAAGGAATGTTTTACGAACGCACCTGTTCTGGCTCATCCTGACCCGTCTCTGCCCTTCATCGTGGAAGTGGACACCTCTGAGagcagaagcagcagcagtagcagcagtagcagcagcagtagcagcagcagcagcagtagcagcagcagcagcagcagcagcagcagcagcagtagcagcagtagcagcagcagcagcagtagcagcagcagcagtagcagcagtagcagcagcagtagcagcagcagcagcagcagcagtagcagcagcaacagtagcagcagtagcagcagcagtagcagtaggagcagtagtagcagcagtagtagcagcagtagcagtagcagcagcagtagcaggagtagcagcagtagtagcagcagtagcatcagcagcagcagtagcagcagtagtagcagcagtagtagtagcagcagtagcagcagtagtagcagcagtagtagcagcagtagtaggaaaagtagtagcagcagtagtagcagcagcagtagtagcagcagtagcagcagcagtagcagcagcagcagcagcagcagcagcagcagcagtagcagtagcagcagcagtagtagtagcagcagcagcagtagcagcagtagtagcagtagtagtagcagtaacagcagcagcagcagcagtagcagcagtagtagcagcagcagcagtagtagcagcagcagcagcagtagtagtagcagcagcagcagcagcagtagcagcagcagtagcagcagtagcagaagcagcagtagcagcagtagcagcagcagtaacagcagtagcagcagcagcagtagcagttgtagcagcagtagtagcagcagtagcagcagtagtagcagcagtagcagcagcagtagcagcagaagcagcagcagcagcagtagcagcagcagcagcagtagtagcagcagcagcagcagcagtagcagcagtagtagcagtagcagtagtagtagcagcagtagcagtagtagcagcagt

Function

NR:

description
PREDICTED: uncharacterized protein LOC106574453

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986866.1 True 1488 mRNA 0.56 5 29213787 29223764

Neighbor

gene id symbol gene type direction distance location
LOC118965608 NA coding downstream 208 29212152 ~ 29213579 (-)
LOC118965623 NA coding downstream 4859 29204150 ~ 29208928 (-)
LOC118965622 NA coding downstream 10307 29202386 ~ 29203480 (-)
LOC110529223 snw1 coding downstream 117752 29046423 ~ 29096035 (-)
lcb2 lcb2 coding downstream 184071 29025283 ~ 29029716 (-)
LOC110529760 LOC106571680 coding upstream 237226 29460990 ~ 29465444 (-)
LOC110529761 cep128 coding upstream 666791 29890555 ~ 29938331 (-)
gtf2a1 LOC106571676 coding upstream 748747 29972511 ~ 29986359 (-)
ches1 LOC105017690 coding upstream 778000 30001764 ~ 30062244 (-)
LOC118965505 NA coding upstream 814817 30038581 ~ 30040011 (-)
G693862 NA non-coding downstream 22695 29190734 ~ 29191092 (-)
G693852 NA non-coding downstream 34359 29179211 ~ 29179428 (-)
G693836 NA non-coding downstream 47519 29166028 ~ 29166268 (-)
G693816 NA non-coding downstream 76336 29137248 ~ 29137451 (-)
G693815 NA non-coding downstream 76713 29136874 ~ 29137074 (-)
G693906 NA non-coding upstream 17919 29241683 ~ 29242006 (-)
G693907 NA non-coding upstream 18755 29242519 ~ 29242788 (-)
G693920 NA non-coding upstream 26611 29250375 ~ 29250584 (-)
G693927 NA non-coding upstream 32006 29255770 ~ 29256077 (-)
G693962 NA non-coding upstream 56978 29280742 ~ 29280965 (-)
G693665 NA other downstream 254955 28958395 ~ 28958832 (-)
G693383 btbd7 other downstream 619356 28593341 ~ 28594431 (-)
si:dkey-85n7.8 NA other downstream 731889 28478817 ~ 28481944 (-)
G692859 NA other downstream 1097739 28115736 ~ 28116048 (-)
G691747 NA other downstream 1897852 27315568 ~ 27315935 (-)
G694858 LOC105017690 other upstream 777999 30001763 ~ 30062168 (-)
G696068 NA other upstream 1623138 30846902 ~ 30847209 (-)
G696073 NA other upstream 1631343 30855107 ~ 30855407 (-)
G696499 NA other upstream 2253590 31477354 ~ 31478027 (-)
LOC110529793 LOC106571728 other upstream 2433962 31657632 ~ 31703525 (-)

Expression


Co-expression Network