trnav-cac-24


Basic Information

Item Value
gene id trnav-cac-24
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 52530999 ~ 52531071 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnav-cac-24
gtttccgtagtgtagtggttattacgttcgcctcacacgcgaaaggtccccggttcgaaaccgggcggaaaca

Function

NR:

description
PREDICTED: interferon-induced protein 44-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnav-cac-24 True 73 mRNA 0.55 1 52530999 52531071

Neighbor

gene id symbol gene type direction distance location
trnav-aac-45 NA coding downstream 900 52530027 ~ 52530099 (-)
trnav-uac-4 NA coding downstream 1102 52529825 ~ 52529897 (-)
trnav-aac-44 NA coding downstream 1287 52529640 ~ 52529712 (-)
trnav-aac-43 NA coding downstream 2442 52528485 ~ 52528557 (-)
trnav-aac-42 NA coding downstream 2644 52528283 ~ 52528355 (-)
trnav-aac-46 NA coding upstream 113 52531184 ~ 52531256 (-)
trnav-aac-47 NA coding upstream 315 52531386 ~ 52531458 (-)
trnav-cac-25 NA coding upstream 1285 52532356 ~ 52532428 (-)
trnav-uac-5 NA coding upstream 1470 52532541 ~ 52532613 (-)
trnav-uac-6 NA coding upstream 1672 52532743 ~ 52532815 (-)
G721235 NA non-coding downstream 40596 52483522 ~ 52490403 (-)
G721207 LOC106584099 non-coding downstream 71340 52448383 ~ 52459659 (-)
G721203 NA non-coding downstream 121771 52408868 ~ 52409228 (-)
G721149 LOC100136012 non-coding downstream 238654 52291980 ~ 52292345 (-)
G721148 NA non-coding downstream 239079 52291672 ~ 52291920 (-)
G721245 NA non-coding upstream 2138 52533209 ~ 52668446 (-)
G721248 NA non-coding upstream 9009 52540080 ~ 52545734 (-)
G721238 NA non-coding upstream 58148 52589219 ~ 52656589 (-)
G721260 NA non-coding upstream 188215 52719286 ~ 52726784 (-)
G721288 NA non-coding upstream 247307 52778378 ~ 52778596 (-)
LOC110530043 LOC106568739 other downstream 1271980 51252355 ~ 51259061 (-)
G719151 NA other downstream 1591528 50936928 ~ 50939471 (-)
LOC110530011 LOC106568709 other downstream 2641747 49866272 ~ 49937001 (-)
G718489 NA other downstream 2693303 49785674 ~ 49837696 (-)
G716488 NA other downstream 3742037 48788521 ~ 48788962 (-)
G721275 NA other upstream 229968 52761039 ~ 52761451 (-)
LOC110529122 LOC106568971 other upstream 932111 53462034 ~ 53478913 (-)
G722459 NA other upstream 967077 53495804 ~ 53499730 (-)
G722602 NA other upstream 1272372 53803443 ~ 53856065 (-)
G722670 NA other upstream 1395157 53926228 ~ 53927959 (-)

Expression


Co-expression Network