Gene
RNA
| Item | Value |
|---|---|
| gene id | trnav-cac-53 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 52685585 ~ 52685657 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: interferon-induced protein 44-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnav-cac-53 | True | 73 | mRNA | 0.51 | 1 | 52685585 | 52685657 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnav-cac-52 | NA | coding | downstream | 3137 | 52682376 ~ 52682448 (-) |
| trnav-cac-51 | NA | coding | downstream | 4443 | 52681070 ~ 52681142 (-) |
| trnav-cac-50 | NA | coding | downstream | 4645 | 52680868 ~ 52680940 (-) |
| trnav-cac-49 | NA | coding | downstream | 5951 | 52679562 ~ 52679634 (-) |
| trnav-aac-139 | NA | coding | downstream | 7459 | 52678054 ~ 52678126 (-) |
| trnav-cac-54 | NA | coding | upstream | 130 | 52685787 ~ 52685859 (-) |
| trnav-cac-55 | NA | coding | upstream | 1759 | 52687416 ~ 52687488 (-) |
| trnav-cac-56 | NA | coding | upstream | 1961 | 52687618 ~ 52687690 (-) |
| trnav-cac-57 | NA | coding | upstream | 3255 | 52688912 ~ 52688984 (-) |
| trnav-cac-58 | NA | coding | upstream | 4763 | 52690420 ~ 52690492 (-) |
| G721245 | NA | non-coding | downstream | 17139 | 52533209 ~ 52668446 (-) |
| G721238 | NA | non-coding | downstream | 28996 | 52589219 ~ 52656589 (-) |
| trnav-cac-22 | NA | non-coding | downstream | 85449 | 52503689 ~ 52600136 (-) |
| G721236 | NA | non-coding | downstream | 93629 | 52484057 ~ 52591956 (-) |
| G721260 | NA | non-coding | upstream | 33629 | 52719286 ~ 52726784 (-) |
| G721288 | NA | non-coding | upstream | 92721 | 52778378 ~ 52778596 (-) |
| G721289 | NA | non-coding | upstream | 93379 | 52779036 ~ 52779473 (-) |
| selenof | sep15 | non-coding | upstream | 107660 | 52793317 ~ 52818726 (-) |
| G721414 | NA | non-coding | upstream | 289140 | 52974797 ~ 52977530 (-) |
| LOC110530043 | LOC106568739 | other | downstream | 1426566 | 51252355 ~ 51259061 (-) |
| G719151 | NA | other | downstream | 1746114 | 50936928 ~ 50939471 (-) |
| LOC110530011 | LOC106568709 | other | downstream | 2796333 | 49866272 ~ 49937001 (-) |
| G718489 | NA | other | downstream | 2847889 | 49785674 ~ 49837696 (-) |
| G716488 | NA | other | downstream | 3896623 | 48788521 ~ 48788962 (-) |
| G721275 | NA | other | upstream | 75382 | 52761039 ~ 52761451 (-) |
| LOC110529122 | LOC106568971 | other | upstream | 777525 | 53462034 ~ 53478913 (-) |
| G722459 | NA | other | upstream | 812491 | 53495804 ~ 53499730 (-) |
| G722602 | NA | other | upstream | 1117786 | 53803443 ~ 53856065 (-) |
| G722670 | NA | other | upstream | 1240571 | 53926228 ~ 53927959 (-) |
