LOC110530116 (tm16h)


Basic Information

Item Value
gene id LOC110530116
gene name tm16h
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 53681608 ~ 53712234 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036985669.1
AGCTTAGTGGAGTAAACACTTGTTTGGTGTTTATGTAATGGTGAGCCTCGTGTTCTGTTGCGCAGGAAGCTACTTGAATTGCACAAGCCCTATGCAATGTAGAAAAATGTCATTTCTGATTCTTTCACGATTTGGGATGATCTGTGCGCATTTCAAATTGTCTGAGGAGAGAAAGGAGCAACAAACTGCTTTGGCCTTGTTGACAAGTAGAAAAGTGATAAAGCTGGCTGTGAGGATTTAGCACTTTGGCAGAATCCTCCGTCTCTCCTTCTGTCACCTCTTTCCCCACTACACGGCACTGATGAGAACTGTTCTTACCCTCCATCTGTCTATGCATCCCCCctttgccctctctctcctcccttctaccTCTCCCCCTTTAGACAAATTGTTTGGGAAACGCCTCTCGCAGGCCAGACGGTACATCATGTCCCATAAATCCTGGCTGAAAATGGTTCCCACGGAAGACTGTGATATCCTAATGACATTCTCAGacacCATAGATGACCACACCTTGCTATGGCTGCTGAACCATATCCGACTGGGAATCCCACAAGCTAAAATCCAGATCAGACAGCATCAACACACACAGGGATATGCGTTCTGTATTACAAGCACATTCGAGAACTTGCTGCgtggtgcagagctgttgggAATGCGCAAAGTGGTGAAACCACAGTACGGAGGCGGAACACGCAGGTTTTCCTGTGAGGAAGATAACATCTATGAGAACATAGAGAGCGAATTGTGCTTTTTCACCTCACAGGAGCGTCAGAGTATCATCAAGTACTGGCTGGATAACCTACGTGCCAAACCAGGGGCGGTCCTTCACAACATTCACTTCCTGGAGGGACAACCAATCATTCCAGAACTGGTGGCCAGAGGTGTAATCTGTCAAGTGTTTCCTCTACACGAGCAACGGATCCTCAGTCAGCTGATGACGTCATGGGTCCAAGCTGTCTGTGAGAGACAGCCTTTGGATGACGTCTGTGATTACTTTGGGGTGAAAATCGGCATGTACTTTGCCTGGCTGGGCTTCTACACCAACTCCATGCTGTACCCTGCCGTCGTTGGCTTCCTGATGTGGATCCTGGCAGAGGCTGACCAGACCAGCCAGGACATCTGCTGTGTGGTGTTTGCCCTTTTCAACGTGGTGTGGGCGACGCTCTTCCTGGAGAGATGGAAGCGGAGAGAGGCCGAGCTGGCATACATGTGGGGAACACTGGACACCCCCGCCGAGCCCCTTGAGGAGCCCCGTCGCCAGTTTCGGGGTGTGAAGCGGTGCAGTCCAATAACAGGCTGTGAGGAGTTATACTACCCACCCTGGAAGAGGACAATGTTCAGGTGGATGGTCAGCCTCCccatctgtctcctctgtctctgcttcgtctTCTTGGCCATGCTTGTCTGTCTGGAGATGCAGGAGTTTGTGATGGAAATTAAGGAGTTACCCAGTATCACAAGATTCATTCCTAAAATGTTGCTGGCCATCGTTGTGACTGTATGTGATGAGGTGTATAGGAAGATCGCCCATTGGCTCAATTATATGGAGAACTACAGACTTCAGAGTGCCTATGAGAATAATCTCATCATTAAAATGGTTTTTTTTGAGTTTATCAATTCTTACCTTAGCCTTTTCTACATCGGATTCTACCTCAAGGACATGGAGCGACTGAAGGAGACGCTAGCCACTCTCCTGATCTTCCGCCAGTTCCTCCAGAACATCAAGGAAGTGCTCCAGCCTTATCTGTACGAGCATCACAAACTAGGAGTATTTACCCCCAAGGTCGTGTGGGAGATTCTCCAGGCCATAGTGCTCAAATACAGCCGCCTGGCTCTAGGAAAGTCCCAGGCTTCATGGACTATCCAGTCCCTGCTAAGCCCCAAAGGCCCTGCCACACTTCctggacagacagaacagaagaagagaggagatctAAAAGCTGGCTATAGGTTTACAGAGGAAGAGTGGGACATAAATTACACACTGAGGCAACGGAAGATTAGCTTCAATGAGAAGGTGCATGTTGCCAGGGACATTGCCTTGGCGACCCAGCCAGAGGACAGCTTCTTGGAGGAGAGTCCCACATTGGTGGAGGAGGGCATGGATCCTTCCAGCATCTTTGAGATAGTCTCTGACATTGTCACCTATGAGTCCTCTGAGACCAAGAAGACTAGTGTCTCCCCACCAAATGGCTATGACACGCTAGTATGTCAGAGATGGAAGAGTCCAATCCCAGAGAAAAAGGCCACAAAGTCCTGGATTGACCCGCCTGATGAGCCCAAGTCTGTCATTCTCAGCCAAGCAGAGGTTGAGAGCTGCATGCAGACATATGAGGACACCCTGCAGGACTACCAGGAGATGTTCATCCAGTTTGGCTACGTGGTGCTCTTCTCCTCCGCCTTCCCGCTGGCTGCTATGTGGGCcctcatcaacaacatcatcgAAATCCGGAGTGACGCCTTGAAGCTCTGCACAGGCCTGCAGAGGCCCTTTGGCCAGAGGGTGGAGAGCATTGgacagtggcagACAGCAATGGAGGCCATGGGCTTGATAGCCATTATGGTGAACTGTTATCTCATTGGCCAGTGTGGTCAGCTGCAGCGTCTCTTCCCCTGGCTGAGCCCTGAGATGGTCATCATCTCCATCGTGGTACTGGAGCATTTTGCCATCCTCCTCAAATACGTCATCCATGTGGCCATCCCTGATATTCCTGGATGGGTCGCAGACGAGATGGCCAAACTAGAGTATCGTCGAAGGGAGGCTTTCAAGAAGCACGAGCGTCAGGCCCAGCAGCACTCCCAGCAACAGCTGAGGAGGCAGCTTGAGGAGGAGGAGCTGCAGCGTCAGGAGGAGCTCCAGACCGAGGCCCAGCAGGAAAGCGAGTACCACAAGGCTGACAAACAGCACCACCATGAGAAGGCCCAGTGGAAGCCTGTGGACAAGCCCAAGAGACCCAGCTCTCTGCTGGGCAACAGCAATGTAATGAAGCTCAAGCAGATCTTCCCCCAGCAGGGGAAGTTCTCCTCAGGCACGGCCCTCTCTCCGCAGTCCCCAACCGGGGGAGAAGCCAAACTAGCAGGCTTCCTCAGCTTCAAGTTCCGGAAGTCTCCGGAGTTGAAGAAGGAGCCGTTGTCGGTAACACCAGCACCGGGGACCGTGGTGACGGCTGCGTCCGTGAACCAGGAAAGGTCCCAGTCCCCCAACAGGACCTTCAGCCAAGGGAAGCTGTTCAGCTTTAGCAGATCAGAGGGGGCAGTGGTGTGTGCGAACGGGCCTCAGCTGTCCAAACCAGGCGATGCTACCCCCCAAACGACTCCTAACAGTCAGCCCACCAGGCAGGACCTGAATACAACTCCCTCAGGCGAGTTGTTACCCTCGTctgagagcgagaggagagaaacaAACAAGACAATCTAACGATACTGACACTTCTGGCTCCAAGTGTTAGTCAATCATCATGGCAATATGTAAAATGTAAGAAAGGGATGCAGAGAACAATAACGTGTTATTATTGTTAACATATCAACATGGTTTAGGTCATACTGAATAAACTAAATAAGCTAAAATGTAATGTAAGGTCAGAATGTAAGGTCAGGTTTTGGGTTCATTCTCCACCATCCAAATGATATAACAGTAAATATAGGCTATATCTGTTCTATATACTGACACCCTAAGTGTATACTATGTACAAATTGCAACAGTTTACCCCCTTGAATGAGGCCCTCCCTAGTACCACAACTAAATGCAGTTATAAGACTGCATGACTTGTGGTTCTGATCATCATGAAGCGATAAGATCTGGATGGCAGTTTATTCCATCCCATATTTTGTCTTTCCATTCATCAGATTTGATGTGTAAAAAGCATGGCGAAACATCTGCATGCCTGAAATAAATGTCTTATTCAGCACCTTATAAGCCAAAGACATCTTATATTCCTGCAATAGTACAGAATGAGCACATTCACGGTGActgaaaaatattttatttttcttaactTTGTTTTTCTATTAATTATTTTAGCACATGAAATAGTGAATGTACCGTCGATGCAAAACACACTCCAATAAACTTCATGAGACCAGA
>XM_021612944.2
CCATCATCAGGTAGGGTAGGCGGGTATCCCCAACCTTGTTCATACATGGAACATCATCTTCCATAGTTGCAGTGCTGTCTTTCCAGCACAGGACCTGCACTTGACAGTGAATTCATGCACCATACTTATGACGTGAGCGTGCGGCACCTAATATCGCCGCGTCTGTAAACACAACTGCACCGCAGACAGCGACAGTgcaggggagaggatggagaagacAGTGCCCACCGAAGAGGACAAGGTAACTAAGCAAGAGCAAATATCTTCAATGTCGTCAGGTGTACTGGACAAATTGTTTGGGAAACGCCTCTCGCAGGCCAGACGGTACATCATGTCCCATAAATCCTGGCTGAAAATGGTTCCCACGGAAGACTGTGATATCCTAATGACATTCTCAGacacCATAGATGACCACACCTTGCTATGGCTGCTGAACCATATCCGACTGGGAATCCCACAAGCTAAAATCCAGATCAGACAGCATCAACACACACAGGGATATGCGTTCTGTATTACAAGCACATTCGAGAACTTGCTGCgtggtgcagagctgttgggAATGCGCAAAGTGGTGAAACCACAGTACGGAGGCGGAACACGCAGGTTTTCCTGTGAGGAAGATAACATCTATGAGAACATAGAGAGCGAATTGTGCTTTTTCACCTCACAGGAGCGTCAGAGTATCATCAAGTACTGGCTGGATAACCTACGTGCCAAACCAGGGGCGGTCCTTCACAACATTCACTTCCTGGAGGGACAACCAATCATTCCAGAACTGGTGGCCAGAGGTGTAATCTGTCAAGTGTTTCCTCTACACGAGCAACGGATCCTCAGTCAGCTGATGACGTCATGGGTCCAAGCTGTCTGTGAGAGACAGCCTTTGGATGACGTCTGTGATTACTTTGGGGTGAAAATCGGCATGTACTTTGCCTGGCTGGGCTTCTACACCAACTCCATGCTGTACCCTGCCGTCGTTGGCTTCCTGATGTGGATCCTGGCAGAGGCTGACCAGACCAGCCAGGACATCTGCTGTGTGGTGTTTGCCCTTTTCAACGTGGTGTGGGCGACGCTCTTCCTGGAGAGATGGAAGCGGAGAGAGGCCGAGCTGGCATACATGTGGGGAACACTGGACACCCCCGCCGAGCCCCTTGAGGAGCCCCGTCGCCAGTTTCGGGGTGTGAAGCGGTGCAGTCCAATAACAGGCTGTGAGGAGTTATACTACCCACCCTGGAAGAGGACAATGTTCAGGTGGATGGTCAGCCTCCccatctgtctcctctgtctctgcttcgtctTCTTGGCCATGCTTGTCTGTCTGGAGATGCAGGAGTTTGTGATGGAAATTAAGGAGTTACCCAGTATCACAAGATTCATTCCTAAAATGTTGCTGGCCATCGTTGTGACTGTATGTGATGAGGTGTATAGGAAGATCGCCCATTGGCTCAATTATATGGAGAACTACAGACTTCAGAGTGCCTATGAGAATAATCTCATCATTAAAATGGTTTTTTTTGAGTTTATCAATTCTTACCTTAGCCTTTTCTACATCGGATTCTACCTCAAGGACATGGAGCGACTGAAGGAGACGCTAGCCACTCTCCTGATCTTCCGCCAGTTCCTCCAGAACATCAAGGAAGTGCTCCAGCCTTATCTGTACGAGCATCACAAACTAGGAGTATTTACCCCCAAGGTCGTGTGGGAGATTCTCCAGGCCATAGTGCTCAAATACAGCCGCCTGGCTCTAGGAAAGTCCCAGGCTTCATGGACTATCCAGTCCCTGCTAAGCCCCAAAGGCCCTGCCACACTTCctggacagacagaacagaagaagagaggagatctAAAAGCTGGCTATAGGTTTACAGAGGAAGAGTGGGACATAAATTACACACTGAGGCAACGGAAGATTAGCTTCAATGAGAAGGTGCATGTTGCCAGGGACATTGCCTTGGCGACCCAGCCAGAGGACAGCTTCTTGGAGGAGAGTCCCACATTGGTGGAGGAGGGCATGGATCCTTCCAGCATCTTTGAGATAGTCTCTGACATTGTCACCTATGAGTCCTCTGAGACCAAGAAGACTAGTGTCTCCCCACCAAATGGCTATGACACGCTAGTATGTCAGAGATGGAAGAGTCCAATCCCAGAGAAAAAGGCCACAAAGTCCTGGATTGACCCGCCTGATGAGCCCAAGTCTGTCATTCTCAGCCAAGCAGAGGTTGAGAGCTGCATGCAGACATATGAGGACACCCTGCAGGACTACCAGGAGATGTTCATCCAGTTTGGCTACGTGGTGCTCTTCTCCTCCGCCTTCCCGCTGGCTGCTATGTGGGCcctcatcaacaacatcatcgAAATCCGGAGTGACGCCTTGAAGCTCTGCACAGGCCTGCAGAGGCCCTTTGGCCAGAGGGTGGAGAGCATTGgacagtggcagACAGCAATGGAGGCCATGGGCTTGATAGCCATTATGGTGAACTGTTATCTCATTGGCCAGTGTGGTCAGCTGCAGCGTCTCTTCCCCTGGCTGAGCCCTGAGATGGTCATCATCTCCATCGTGGTACTGGAGCATTTTGCCATCCTCCTCAAATACGTCATCCATGTGGCCATCCCTGATATTCCTGGATGGGTCGCAGACGAGATGGCCAAACTAGAGTATCGTCGAAGGGAGGCTTTCAAGAAGCACGAGCGTCAGGCCCAGCAGCACTCCCAGCAACAGCTGAGGAGGCAGCTTGAGGAGGAGGAGCTGCAGCGTCAGGAGGAGCTCCAGACCGAGGCCCAGCAGGAAAGCGAGTACCACAAGGCTGACAAACAGCACCACCATGAGAAGGCCCAGTGGAAGCCTGTGGACAAGCCCAAGAGACCCAGCTCTCTGCTGGGCAACAGCAATGTAATGAAGCTCAAGCAGATCTTCCCCCAGCAGGGGAAGTTCTCCTCAGGCACGGCCCTCTCTCCGCAGTCCCCAACCGGGGGAGAAGCCAAACTAGCAGGCTTCCTCAGCTTCAAGTTCCGGAAGTCTCCGGAGTTGAAGAAGGAGCCGTTGTCGGTAACACCAGCACCGGGGACCGTGGTGACGGCTGCGTCCGTGAACCAGGAAAGGTCCCAGTCCCCCAACAGGACCTTCAGCCAAGGGAAGCTGTTCAGCTTTAGCAGATCAGAGGGGGCAGTGGTGTGTGCGAACGGGCCTCAGCTGTCCAAACCAGGCGATGCTACCCCCCAAACGACTCCTAACAGTCAGCCCACCAGGCAGGACCTGAATACAACTCCCTCAGGCGAGTTGTTACCCTCGTctgagagcgagaggagagaaacaAACAAGACAATCTAACGATACTGACACTTCTGGCTCCAAGTGTTAGTCAATCATCATGGCAATATGTAAAATGTAAGAAAGGGATGCAGAGAACAATAACGTGTTATTATTGTTAACATATCAACATGGTTTAGGTCATACTGAATAAACTAAATAAGCTAAAATGTAATGTAAGGTCAGAATGTAAGGTCAGGTTTTGGGTTCATTCTCCACCATCCAAATGATATAACAGTAAATATAGGCTATATCTGTTCTATATACTGACACCCTAAGTGTATACTATGTACAAATTGCAACAGTTTACCCCCTTGAATGAGGCCCTCCCTAGTACCACAACTAAATGCAGTTATAAGACTGCATGACTTGTGGTTCTGATCATCATGAAGCGATAAGATCTGGATGGCAGTTTATTCCATCCCATATTTTGTCTTTCCATTCATCAGATTTGATGTGTAAAAAGCATGGCGAAACATCTGCATGCCTGAAATAAATGTCTTATTCAGCACCTTATAAGCCAAAGACATCTTATATTCCTGCAATAGTACAGAATGAGCACATTCACGGTGActgaaaaatattttatttttcttaactTTGTTTTTCTATTAATTATTTTAGCACATGAAATAGTGAATGTACCGTCGATGCAAAACACACTCCAATAAACTTCATGAGACCAGA

Function

NR:

description
anoctamin-8-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K19502 ANO8, TMEM16H; anoctamin-8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036985669.1 False 4087 mRNA 0.49 16 53681608 53706662
XM_021612944.2 True 3991 mRNA 0.50 17 53681608 53712234

Neighbor

gene id symbol gene type direction distance location
LOC110530114 LOC106568966 coding downstream 21602 53635788 ~ 53709367 (-)
LOC110530113 LOC106598949 coding downstream 46016 53599635 ~ 53635592 (-)
LOC110530111 LOC106598945 coding downstream 95987 53500456 ~ 53585621 (-)
LOC118965526 NA coding downstream 150674 53527596 ~ 53533919 (-)
LOC110529122 LOC106568971 coding downstream 202695 53462034 ~ 53478913 (-)
plvapa LOC106568963 coding upstream 9938 53722172 ~ 53728671 (-)
ocel1 LOC106568960 coding upstream 94429 53806663 ~ 53812192 (-)
LOC110530934 LOC106568959 coding upstream 106472 53818706 ~ 53880785 (-)
insl3 NA coding upstream 202586 53914820 ~ 53917617 (-)
LOC110530121 LOC106568956 coding upstream 253763 53965997 ~ 53995304 (-)
G722523 NA non-coding downstream 1613 53677925 ~ 53679995 (-)
G722488 NA non-coding downstream 85835 53595556 ~ 53595773 (-)
G722459 NA non-coding downstream 184181 53495804 ~ 53499730 (-)
G721825 NA non-coding downstream 200483 53480893 ~ 53481125 (-)
G722612 NA non-coding upstream 116445 53828679 ~ 53829059 (-)
G722659 NA non-coding upstream 192914 53905148 ~ 53905462 (-)
G722686 NA non-coding upstream 232360 53944594 ~ 53944946 (-)
G722694 NA non-coding upstream 239961 53952195 ~ 53952400 (-)
G721275 NA other downstream 920157 52761039 ~ 52761451 (-)
LOC110530043 LOC106568739 other downstream 2422589 51252355 ~ 51259061 (-)
G719151 NA other downstream 2742137 50936928 ~ 50939471 (-)
G722602 NA other upstream 91209 53803443 ~ 53856065 (-)
G722670 NA other upstream 213994 53926228 ~ 53927959 (-)
G722761 NA other upstream 412145 54124379 ~ 54139341 (-)
G722854 NA other upstream 538880 54251114 ~ 54251546 (-)
G722864 LOC106581475 other upstream 569451 54281685 ~ 54281978 (-)

Expression


Co-expression Network