LOC118965529


Basic Information

Item Value
gene id LOC118965529
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 55211750 ~ 55214733 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052912.1
CCACTGGCCCAGCTTCGGGAAGCCTCCTCTGTGCAGAgtctggagaggagagtggagcgTTCAACCATTCTGGGAGGGGTGCCCGTGCCTTAAAGCCTAGCACccaggTGTGTATGTGGAGCAGGTAGGGGACGGTTCCTGGGCGCTGGGGATGAGATCCTGGAGGTGAACGGGGAGGCAGTGGCTGGACTGACCCTGGATCAGGTGTCAGGTCTCATGACCCGCAACAGCACCGCCTCTATCCATATATCCTGCCACTCCGTCGAAACCAGCGATGAGCAATGCAATACTGCAATATTCTATTATCCATTTCAATAAATTAAAAAACACTGGACACTGCCCTGTGATGATGTCATGACGAAAACACGAGAATGGAAATAAGCAAGCATAATGAGAGATTTGTTTAACTCTGGGAGAACCAAAGGAAGGACATAATCAACCTAATTATATTTGTCCATTATTAGGCCTAGTCTTTGAAGATTCAGGCAAATGTAAGTACTGGTAAATCCAAACTGATGTCAAATAAAACAGAGGAGAAATAA

Function

NR:

description
uncharacterized protein LOC110508869

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052912.1 True 542 mRNA 0.48 2 55211750 55214733

Neighbor

gene id symbol gene type direction distance location
LOC110530157 LOC106568924 coding downstream 647 55203683 ~ 55211103 (-)
LOC110530155 LOC106568925 coding downstream 30970 55154678 ~ 55180780 (-)
LOC110530150 NA coding downstream 122030 55085968 ~ 55089720 (-)
LOC110530149 LOC106568933 coding downstream 127233 55074480 ~ 55084517 (-)
LOC110530144 LOC106568935 coding downstream 236604 54698833 ~ 54975146 (-)
LOC110530159 LOC106569020 coding upstream 3238 55217971 ~ 55223328 (-)
LOC110530161 LOC106568919 coding upstream 89947 55304680 ~ 55313604 (-)
LOC110530163 LOC106568918 coding upstream 120879 55335612 ~ 55337598 (-)
si:ch211-106h4.4 LOC106568915 coding upstream 208933 55423666 ~ 55456052 (-)
LOC110530166 arpc5 coding upstream 246463 55461196 ~ 55468070 (-)
G723844 NA non-coding downstream 24870 55186561 ~ 55186880 (-)
G723843 LOC106569022 non-coding downstream 25623 55185627 ~ 55186127 (-)
G723814 NA non-coding downstream 70916 55139311 ~ 55140834 (-)
G723801 NA non-coding downstream 94703 55116822 ~ 55117047 (-)
G723798 NA non-coding downstream 103768 55107464 ~ 55107982 (-)
G723891 NA non-coding upstream 42929 55257662 ~ 55273903 (-)
G723956 NA non-coding upstream 163357 55378090 ~ 55378339 (-)
G723967 NA non-coding upstream 184316 55399049 ~ 55399513 (-)
G723969 NA non-coding upstream 187879 55402612 ~ 55403050 (-)
G722864 LOC106581475 other downstream 929772 54281685 ~ 54281978 (-)
G722854 NA other downstream 960204 54251114 ~ 54251546 (-)
G722761 NA other downstream 1072409 54124379 ~ 54139341 (-)
G722670 NA other downstream 1283791 53926228 ~ 53927959 (-)
G722602 NA other downstream 1355685 53803443 ~ 53856065 (-)
G723955 NA other upstream 162548 55377281 ~ 55377776 (-)
G723966 NA other upstream 181891 55396624 ~ 55396885 (-)
G724287 LOC106568908 other upstream 420805 55635538 ~ 55646014 (-)
G724400 NA other upstream 570784 55785517 ~ 55791485 (-)
G724943 LOC106604981 other upstream 905470 56120203 ~ 56128288 (-)

Expression


Co-expression Network