Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965678 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 56549500 ~ 56549579 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005053056.1 | True | 80 | mRNA | 0.38 | 1 | 56549500 | 56549579 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965684 | NA | coding | downstream | 168 | 56549263 ~ 56549332 (-) |
| LOC118965658 | NA | coding | downstream | 413 | 56549011 ~ 56549087 (-) |
| LOC118965679 | NA | coding | downstream | 659 | 56548758 ~ 56548841 (-) |
| LOC118965677 | NA | coding | downstream | 1449 | 56547979 ~ 56548051 (-) |
| LOC118965616 | NA | coding | downstream | 8015 | 56539796 ~ 56541485 (-) |
| LOC118965627 | NA | coding | upstream | 27383 | 56576857 ~ 56579645 (-) |
| lrrc53 | LOC106568997 | coding | upstream | 33447 | 56583026 ~ 56588553 (-) |
| LOC110530944 | NA | coding | upstream | 39205 | 56588784 ~ 56601317 (-) |
| LOC110530945 | LOC106568882 | coding | upstream | 120328 | 56669907 ~ 56763302 (-) |
| LOC110530198 | LOC106568881 | coding | upstream | 233699 | 56783278 ~ 56793172 (-) |
| G725260 | NA | non-coding | downstream | 12098 | 56537182 ~ 56537402 (-) |
| G725257 | NA | non-coding | downstream | 13747 | 56535549 ~ 56535753 (-) |
| G725254 | NA | non-coding | downstream | 16835 | 56532462 ~ 56532665 (-) |
| G725245 | NA | non-coding | downstream | 21690 | 56527590 ~ 56527810 (-) |
| G725267 | NA | non-coding | upstream | 4001 | 56553580 ~ 56553862 (-) |
| G725268 | NA | non-coding | upstream | 4767 | 56554346 ~ 56555276 (-) |
| G725282 | NA | non-coding | upstream | 41524 | 56591103 ~ 56591352 (-) |
| LOC110530186 | tm56b | other | downstream | 162984 | 56374588 ~ 56386555 (-) |
| G725007 | LOC106568897 | other | downstream | 316561 | 56219516 ~ 56232939 (-) |
| G724943 | LOC106604981 | other | downstream | 421212 | 56120203 ~ 56128288 (-) |
| G724400 | NA | other | downstream | 758015 | 55785517 ~ 55791485 (-) |
| G724287 | LOC106568908 | other | downstream | 903486 | 55635538 ~ 55646014 (-) |
| G725280 | LOC106568997 | other | upstream | 38764 | 56588343 ~ 56589271 (-) |
| penka | LOC106569009 | other | upstream | 280062 | 56828799 ~ 56840147 (-) |
| G726496 | NA | other | upstream | 586562 | 57136141 ~ 57137113 (-) |
| chd7 | LOC106599585 | other | upstream | 736937 | 57224058 ~ 57305576 (-) |
| G726885 | NA | other | upstream | 1255809 | 57805388 ~ 57811422 (-) |
