LOC110530944


Basic Information

Item Value
gene id LOC110530944
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 56588784 ~ 56601317 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052921.1
ATCCATGTGTGTGGAGTGAACCCAATGGAGACCAACACCTGCTCTGGGACCTACACCAGGAAGCCCAGCCTGCCCTACACAGGAACTGATGTGTCCGGGGTTGTGGAGGCTGTTGGAGATGGGGTCCAACTTACAGGCTGGTGACCGTGTGTTTGCCACGGCCACAGAGACTGGAAGGTATGCAGAATACACCGTTGTGTCTGATGACCTTGTCTCCCGGCTGCCAGACTCCTTAGACTACAAACAGGGAGCTGCCATTTGGGATCCCTTACTTCACAGCATACAGAGCTCTCTCCCATAAAGCACATGCTAAAGCAGGCGAGACAGTACTCATCCATGGAGCCAGCGGCGGGGTGGGGGTGTGCAGCGTGTCAGGTGGCCTTGGGTCTGAGGGTCCTGGGGACAGCAGGGACCGCAGAGGGACTGAAGCTTGCCCTGAAGAACAGAGCTCACATAgaatgctctttccatgacatagactgaccacatgaatccagGTACAAGAGAAGTCAGGGGTGCGTATGACACCGTCCCATCCATGCCATCTCGGGTGACAGCCCCTGCGGACTGAGCATGCCCAGAGGAGCACAGGAGCAGTAAGACTAGGCCCATGAAGGAGTTAAGACAAGATGGTGCTTTAAGCTTTAAGACGATGATTCCCTGAGACCACTTTCATGGATGAGCAAACAAAAAACCATGCAGCCTGGCCAATAACCAAACCATGAGAAGTGTTCTCCTGATGCTGATGCTGTCAATCCCACGCACCCAGTGCCTCTCTTCATGTCCAGCTTCCTGTGTGGTGTGCTCTGACGACGCTGTCATCTGCCACAAGCTCTCCAACT

Function

NR:

description
quinone oxidoreductase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052921.1 True 842 mRNA 0.54 7 56588784 56601317

Neighbor

gene id symbol gene type direction distance location
lrrc53 LOC106568997 coding downstream 231 56583026 ~ 56588553 (-)
LOC118965627 NA coding downstream 9338 56576857 ~ 56579645 (-)
LOC118965678 NA coding downstream 39205 56549500 ~ 56549579 (-)
LOC118965684 NA coding downstream 39452 56549263 ~ 56549332 (-)
LOC118965658 NA coding downstream 39697 56549011 ~ 56549087 (-)
LOC110530945 LOC106568882 coding upstream 68590 56669907 ~ 56763302 (-)
LOC110530198 LOC106568881 coding upstream 181961 56783278 ~ 56793172 (-)
LOC110530946 LOC106568881 coding upstream 213409 56813859 ~ 56827689 (-)
penka LOC106569009 coding upstream 227482 56828799 ~ 56840147 (-)
bpnt2 impad1 coding upstream 269884 56871201 ~ 56881832 (-)
G725268 NA non-coding downstream 33508 56554346 ~ 56555276 (-)
G725267 NA non-coding downstream 34922 56553580 ~ 56553862 (-)
LOC110530193 NA non-coding downstream 38118 56544944 ~ 56550688 (-)
G725299 NA non-coding upstream 3950 56605267 ~ 56605699 (-)
G725309 NA non-coding upstream 12635 56613952 ~ 56614394 (-)
G725311 NA non-coding upstream 13797 56615114 ~ 56615433 (-)
G725321 NA non-coding upstream 23363 56624680 ~ 56625152 (-)
G725329 NA non-coding upstream 29672 56630989 ~ 56631245 (-)
LOC110530186 tm56b other downstream 202268 56374588 ~ 56386555 (-)
G725007 LOC106568897 other downstream 355845 56219516 ~ 56232939 (-)
G724943 LOC106604981 other downstream 460496 56120203 ~ 56128288 (-)
G724400 NA other downstream 797299 55785517 ~ 55791485 (-)
G724287 LOC106568908 other downstream 942770 55635538 ~ 55646014 (-)
G726496 NA other upstream 534824 57136141 ~ 57137113 (-)
chd7 LOC106599585 other upstream 685199 57224058 ~ 57305576 (-)
G726885 NA other upstream 1204071 57805388 ~ 57811422 (-)
G726900 NA other upstream 1218730 57820047 ~ 57846689 (-)

Expression


Co-expression Network