LOC110530205 (LOC106568875)


Basic Information

Item Value
gene id LOC110530205
gene name LOC106568875
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 57008139 ~ 57031674 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613082.2
CTCAACTAAACCATAGCGACGTGCCCTGTGTTGAGGTTAAGAAACATATGTTTTATTGACTCTTCACTAGTTCGTCAATATAAGATAATCAAGAGGAATATTTCGTATTGTGTGTTGTAGTTTAGTTGAAAAGGGGGCGCGTATAAATAACTTATTTTTGCACCAACAATTTGCGCCCTCCATCTCCAATTCATCTGTTGAAGGACCCTATATAATTTTGAGATTTTAACAACGACGAATGAAATGGCAGATGAATATGTACTACTTGGAGCGTCCGAGTTCATCAAAGACCGGTTGTATTTTGCAACCCTTAGAACCAAACCGAAAACTACAGCAAACTCTCACTACTTCAGCACAGATGATGAATTTCTCTATGAGAACTTCTATGCTGACTTTGGACCCCTGAATCTGGGCATGCTGTACAGGTACTGCTGTAAACTGAACAAGAAGCTCAAGTCCTTCACTCATTCCAGAAAGAGGGTGATTCACTACACCAGCTATGACCAGAGGAAGAGGGCCAATGCTGCAGTACTTATTGGTGCCTATTCTGTGATCTATTTGAAGAGAAGCCCAGAGGAGGCCTACAGGAGCCTCATCTCAGGAAACAATACTGCATATCTGCCTTTCagGGACGCTGCTCTCGGAGACTGCACGTACAATTTGACCATCCTAGACTGTTTACAAGGAATACGCAAGGCCCTGCAATGTGGATTCTTCAACTTTGAGACGTTTGATGTGGAAGAGTATGAACATTACGAGCGAGTAGAGAATGGAGACATGAACTGGATTATTCCTGGGAAGATTTTGGCCTTTAGTGGACCTCACCCAAGAAGCAAGATAGAGAATGGATACCCTCTCCATGCTCCAGAGGCCTACTTCCCGTATTTCCAGGAGCATCATGTAACCGCCGTGGTGCGGCTCAACAGGAAGATCTATGACGGACGGCGGTTCACTGACGGCGGCTTCGAGCACCACGACCTGTTCTTCGTGGATGGAACCACGCCCAGTGACCTCATCACACGACGCTTCCTCCACGTGTGTGAGAGCACTGAGGGCGCTGTGGCTGTCCACTGCAAAGCGGGTCTGGGTCGTACGGGGACTCTGATAGGTTGTTACCTGATGAAGCACTATCGTTTCACAGCGGCTGACGCCATCGCCTGGATCAGGATCTGCAGGCCTGGATCCATCATCGGACCTCAGCAGGACTTTCTAGAAGATAAGCAGCACAGTATGTGGGTGCAGGGTGACATGCATCGCACCAAACAGAAGCAGCAGCAGCGTCGCCAGCGGCCAAAGCTGGACCAGGAAGTGACTTGCCTCGTCTCCAGCATGGACGACCTGTCAATCAACACCGTTCTTTATAAGTCCTTCAGCCTGGATGAGAATAACTACAGGGAGTGTCTGACCCAAGGAGATAAACTCAGGGATTTGAAAGGCCGTCGCTCATCCAGGTCTGCCACCACGTcacgGTTGAATTTGACAAAGACCAGTCAGACCTCTATCACCCCTCCCAAGTGTTCCAGGCTATCTCAGGTCCctgtccccttctcctcctcctcttctcccaagAGGCTGGTGCAAAGCTCCTCATCATCAGCTAGTAACCTTAAGAGtcCGTTTAGCCTGAGTATGTTCAGCTCTAAGGCTACTACCATTCACTGAGCCCACGTTGATCACTGACTTTTCATCTTTGACCTTCTGACCTTCCAGTTGACCCCAGGAGACAGGAGGTTAACCCACGATAGTCTCTGTTATAAATGCACGTTAAATAACatttaataatacaaaaaaaaatatctaaTCCACCCCTGAGACACTctgtaaaaaataatatttgtaacAATTGGATTTGTCGACATGATCTCATTTCAATCAATGTAATTGTTTGATTTCAAAATGGGTTTATTATCATTGTAATTGTGTGCAAGGAGAATGTTTATCatggctttctctttctcttattCAGTTATTTAATTTCTATTGTTTGACGCTGTAAAAGAGGACACATCCTACTGTACACTCAATTTATTCATGAGTGGCTGTCTTATGAATGTTGTCATTCAGGAGATCCATTTGTTTTATGTGAATACACATTTGGATTGTAACAGAAGTGACTCTGGTTGAGCACTTTCTTTCGGACTTGTTTTTACGACTCTTGTTGACAGGCTCGAGACAATTGTTTTGTTTTAAATGACTTTAAGTAGTAGGCCTGTATGGCGTATATGGAATGTATTTCTGCAAACTTTGCAGAAATACTATTAGTACATTGTCATTTAAATTTGATTAAAATTATTCCTT

Function

NR:

description
dual specificity protein phosphatase CDC14AB-like

GO: NA

KEGG:

id description
K06639 CDC14; cell division cycle 14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613082.2 True 2298 mRNA 0.44 13 57008139 57031674

Neighbor

gene id symbol gene type direction distance location
LOC110530203 LOC106568877 coding downstream 61349 56896586 ~ 56946790 (-)
bpnt2 impad1 coding downstream 126307 56871201 ~ 56881832 (-)
penka LOC106569009 coding downstream 167992 56828799 ~ 56840147 (-)
LOC110530946 LOC106568881 coding downstream 180450 56813859 ~ 56827689 (-)
LOC110530198 LOC106568881 coding downstream 214967 56783278 ~ 56793172 (-)
LOC110530209 NA coding upstream 109305 57139075 ~ 57146180 (-)
LOC110530210 LOC106595335 coding upstream 144197 57175871 ~ 57180428 (-)
chd7 LOC106599585 coding upstream 192384 57224058 ~ 57305576 (-)
LOC110530212 rab2a coding upstream 275741 57307415 ~ 57325324 (-)
LOC110530214 LOC106568870 coding upstream 453567 57485241 ~ 57511592 (-)
G726429 NA non-coding downstream 17803 56989964 ~ 56990336 (-)
G726430 NA non-coding downstream 18369 56989121 ~ 56989770 (-)
G726404 NA non-coding downstream 55960 56951973 ~ 56952179 (-)
G726403 NA non-coding downstream 56265 56951675 ~ 56951874 (-)
G726521 NA non-coding upstream 93340 57125014 ~ 57130518 (-)
G726598 NA non-coding upstream 262950 57294624 ~ 57361794 (-)
G726625 NA non-coding upstream 334440 57366114 ~ 57366350 (-)
G726639 NA non-coding upstream 363603 57395277 ~ 57395557 (-)
G725280 LOC106568997 other downstream 418868 56588343 ~ 56589271 (-)
LOC110530186 tm56b other downstream 621623 56374588 ~ 56386555 (-)
G725007 LOC106568897 other downstream 775200 56219516 ~ 56232939 (-)
G724943 LOC106604981 other downstream 879851 56120203 ~ 56128288 (-)
G726496 NA other upstream 104467 57136141 ~ 57137113 (-)
G726885 NA other upstream 773714 57805388 ~ 57811422 (-)
G726900 NA other upstream 788373 57820047 ~ 57846689 (-)
LOC110530228 LOC106569007 other upstream 831064 57858233 ~ 57864165 (-)

Expression


Co-expression Network