si:dkeyp-13a3.10 (LOC106568869)


Basic Information

Item Value
gene id si:dkeyp-13a3.10
gene name LOC106568869
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 57515189 ~ 57532294 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613103.2
CTACGCATTTAAAAGTCAACATAAGGACGGACTACTCATAGCCACAAATCCAGAGGCTACGCACTTAGCTATGGACGTTTGATTGATAAACGCTCTGCCCTTCATCATTCTACCTGTTTGATGTTGGAAAGGAGAACACGAGCGAGTCCTTTCTAATGATATATAATCTATTATAATTGGTTTACGTCTTGGAGGTTATTTTAAACTACAGTACATCATTTCCAAAGCCAGTCCTCGCATAGTGCAAAGATGCAACTTCCACTTACATTCATTCTGTTTTTCAATTTAAGTTGGGGTCTTCCAATTGACACGGTCATTCTGTTCCAGCGGTCGGGAGTGGTCGGCGAGATGGAGACCGTCGAGCAGGTGTTGGTCAACGGAGCACCTCTCTCCGGCAGCGGGAAATACGTCAGTGGCATTCTCCGTGCTGTATTGATGGGCAACTACGAGTCTTTTCAGCAGGCGTTCGAGATCGAAGAAAATGTCACCAACACCATGACAAAAAATCCTACTTACCAGTACCTGCGTGTGCGTGAATGCAAACTGAATGGATTTCGAGTGGTGCATTCGACCGACCAGCTCCTTGTCAACGGGAATGACTTCCTGACTTTGGACCAATCCACAGACACCTGGACAGCTGAGGTACCACAGGCCCTCTCACTCAAACAGCTTTGGGACTGGGACACTGAGTTCACGAGGAGGGAGAAGATGCAACTCCATGAGAGCTGTACCGAACTGATGAAGGAACTCAGACATTCCGAGCCCACCACCAATAGAGGAACGTCCCTGCTGACTGTCCTGGCTCCACTGTTTGCATGCCTGACCTTTGTTGTCATGGTTATTGCAAGCTTCCTCATCTCTAAACAACGAGATCCCAGAGTTTCCAGACACCCTGGAGGTGTACTTGGCTCCATTGTCCACTACTATCAGAATGTCACAGAAACACAATCAGGAAAAGACTACCAGGCCCTCTAAAACTCAACCCACCTCCGCTCATCCACCTCTGATGACTGCtctgtgaagggagttgtacgagatcttcagtttcttggcaatttctcacatggaatagccttcatttctcagaacaagaataaagtgacgagtttcagaagaaa

Function

NR:

description
uncharacterized protein LOC110530215

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613103.2 True 1118 mRNA 0.47 6 57515189 57532294

Neighbor

gene id symbol gene type direction distance location
LOC110530214 LOC106568870 coding downstream 3597 57485241 ~ 57511592 (-)
LOC110530212 rab2a coding downstream 189865 57307415 ~ 57325324 (-)
chd7 LOC106599585 coding downstream 209613 57224058 ~ 57305576 (-)
LOC110530210 LOC106595335 coding downstream 334761 57175871 ~ 57180428 (-)
LOC110530209 NA coding downstream 369009 57139075 ~ 57146180 (-)
LOC110530221 LOC106568860 coding upstream 109484 57641778 ~ 57720685 (-)
LOC110530224 LOC106568859 coding upstream 269544 57801838 ~ 57803851 (-)
lpar5a LOC106568857 coding upstream 279249 57811543 ~ 57813057 (-)
LOC110530228 LOC106569007 coding upstream 325939 57858233 ~ 57864165 (-)
snorc LOC106568856 coding upstream 333870 57866164 ~ 57876385 (-)
G726714 NA non-coding downstream 25774 57489011 ~ 57489415 (-)
G726692 NA non-coding downstream 57329 57457554 ~ 57457860 (-)
G726653 NA non-coding downstream 95358 57419559 ~ 57419831 (-)
G726644 NA non-coding downstream 106967 57407952 ~ 57408222 (-)
G726639 NA non-coding downstream 119632 57395277 ~ 57395557 (-)
G726738 NA non-coding upstream 2718 57535012 ~ 57535456 (-)
G726739 NA non-coding upstream 4382 57536676 ~ 57536961 (-)
G726746 NA non-coding upstream 15037 57547331 ~ 57547549 (-)
G726754 NA non-coding upstream 17122 57549416 ~ 57549712 (-)
G726755 NA non-coding upstream 19209 57551503 ~ 57551891 (-)
G726496 NA other downstream 378076 57136141 ~ 57137113 (-)
penka LOC106569009 other downstream 675063 56828799 ~ 56840147 (-)
G725280 LOC106568997 other downstream 925918 56588343 ~ 56589271 (-)
LOC110530186 tm56b other downstream 1128673 56374588 ~ 56386555 (-)
G726885 NA other upstream 273094 57805388 ~ 57811422 (-)
G726900 NA other upstream 287753 57820047 ~ 57846689 (-)
G731764 NA other upstream 4512741 62045035 ~ 62048119 (-)
LOC110530961 dhx9 other upstream 4648393 62165849 ~ 62185180 (-)

Expression


Co-expression Network