XLOC_025846


Basic Information

Item Value
gene id XLOC_025846
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 58711054 ~ 58712370 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052829
cattaacacacagagacacacacacacacacacacacacacacagctttgtttttgtgtttttattctgtacaaactgtattttctgttGCTCTACCTCAACTCTATCTCTAAACGCAGCCTTCACAGGAACAACTCTGCATGATTTAAAAGCTTTTGGAGAAATAAAGACTGTCAGGAATGTCTGATATATATCAACATTCTTTacatctcagaattctgactttacatgttgaaattctgactttatataacGCAGttgtgactttatttctcagaattgtgtaatataaagtcataattgaaAGTTATAAAGTATTTTCCTGTTATGGAGACTGATCTAACATggagtttaaaagatgcacacaCTGACAAATTGCATTAGCACATATAATAGAGAAACATATAGAAATCTTACCTTTAGGTATTTGCAGGAATCACAACTATACACGACTCTTTATTGTTTAACACgcttttaaaaaaggaaatatacAGGCTAGTTAGGCTATCTatgtatttttatgaatttgCACCATTTAGGAATTATAAAGCATTAAATGGAGCACCTGATTCCTCCAAAAGTCTAAAATTAAGATGTCTATATTATTTAGCAGTTAAATGTGTAACAATGATGTGATTTACATTTGGCTGATGTAAATTCTACTGAATGCAGCAGCTCTTTATTGAATGTTGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052829 True 693 lncRNA 0.32 2 58711054 58712370

Neighbor

gene id symbol gene type direction distance location
XLOC_025845 CU570691.1 coding upstream 299 58702320 ~ 58710755 (+)
XLOC_025844 CU571382.5 coding upstream 16017 58694176 ~ 58695037 (+)
XLOC_025843 NA coding upstream 28168 58682557 ~ 58682886 (+)
XLOC_025842 CU571382.1 coding upstream 37848 58669574 ~ 58673206 (+)
XLOC_025841 CU571382.1 coding upstream 41561 58667974 ~ 58669493 (+)
XLOC_025847 NA coding downstream 330 58712700 ~ 58715206 (+)
XLOC_025848 NA coding downstream 93845 58806215 ~ 58811833 (+)
XLOC_025849 igl1c3 coding downstream 120936 58833306 ~ 58835177 (+)
XLOC_025850 NA coding downstream 123091 58835461 ~ 58857483 (+)
XLOC_025851 CABZ01044154.1 coding downstream 249534 58961904 ~ 58967097 (+)
XLOC_025429 BX649540.1 misc upstream 28462018 30248739 ~ 30249036 (+)
XLOC_025837 NA non-coding upstream 30985 58654524 ~ 58680069 (+)
XLOC_025853 NA non-coding downstream 312564 59024934 ~ 59027837 (+)

Expression


Co-expression Network