lpar5a (LOC106568857)


Basic Information

Item Value
gene id lpar5a
gene name LOC106568857
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 57811543 ~ 57813057 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613122.2
TTCAACATCCAGCTCTGACAGCTGTAGCAGTTTAGTGTCAGTTCATGCTAGTCCTCCAGAGATGACTAACGCCACCTGCAACATCACCCACTACAGGTACCCTCTCTTCACAGCCACCTACAGTGTCGTGCTGGCCCTGGGTCTTCCCctcaacaccctctctctctggctcctgtTATGCCGCTTGAGGGTCCGCTCGGTGCCCTTGATCTACATGGCCAACCTGGCCCTCTCAgacctcctcttcaccctctccaTGCCCTTCCGGATCCTGTACTATGCCAGGCGCCACTGGCCCTATGGACACCTGGCCTGCATCGTCTCTGGGACTCTGTTTAACGTCAACCTCTACTCCAGCTCGTTCTTCATCATGTTTATTAGCGTGGACCGGTTCCTGGCTGTGGTCTATCCTCTGCGCTCACGCCCACTGAGGAGGATCGGTGTGGCTTGTAAGGCATGTGCGGCCGTATGGGTGTTGATTGGTGCCATGGCGGTGCCAGTGGCACTGACTCACCATGCCAGACAGAACCAGTGCTTAGGGTGGAGTTGCTTCGAGGGCTACACTCAGAATGAGTGGCACTTTGGGTTCAATATCATCTGCGTGGCTGCTATCGTGGGAAATGTCATTCCGTTCGCTGTCATCGTGGGCTGTACGGTGGTCGTGGTGCTTAAGCTGAGAGTGCAGAAGGCCTCCTCATCCTCTATGGATAAGAGCCAGATGGTGTGGCTGCTTGTGATCAACCTTTTGATCTACACAGTGTGTTTCATCCCCTTTCATGTTGCAGTAGTCCTATATGGGCTCCACAAGCTACGATTCCTTCAATCCCAGTTCCCCTTCTTTGACTTCCTTATTGGAACTATCTGTTTGGCTTGTGCAAACAGCTTCCTGGATCCTCTCATCTACTACTTCAGCTCCAAGATTCTGAAGATAGGGAGAGGGAATACAGGAACTTGAGTTTAATTCCATGGTTCTGCCTAGTTCTGCCTCGTAGTGGAGGACTGGCATTAGTAGTGGTGAGAATGCTAGAGATGGTCTTAAACAAGTTAATGGTGGACTTTGTTGTTCTTACATCTTCTATACTGTATTCATGTGTGCGTGTGAGAAGTCAAATGACAAATGGAAGGCAATTAGATTGGTTAGGGTGTTGACTTAAGAAGCACCCTCATTTGTCTGGGGAACGAAATGTCAGTTgtggtgtgtgcttgtgtgtgtgtgttcgtgtggcAGGAAAGGGATGTCACTAATAGCCCTTGAAGTACCGTAGATACATAATTAATGTACCAAATGTTGCATATGACTGTTAAATTGTAGCTTCGTCCTTTATTGTGAGATTTTATAAAGCCGTTTTATAAACCTGTTGATTGTCTTCCTCTGAAGGGAGGATGTAGTTGAAACGTAGCAATGTTATTTTCTCTGATTATTGGTCATTGGTCTGACTTCTGTGCTTGGATTTGCCGCAATTGAATGACAGATTGTGggaatgtttatttttatataaGAAATATATTCAATGT

Function

NR:

description
lysophosphatidic acid receptor 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613122.2 True 1515 mRNA 0.48 1 57811543 57813057

Neighbor

gene id symbol gene type direction distance location
LOC110530224 LOC106568859 coding downstream 7692 57801838 ~ 57803851 (-)
LOC110530221 LOC106568860 coding downstream 90858 57641778 ~ 57720685 (-)
si:dkeyp-13a3.10 LOC106568869 coding downstream 279249 57515189 ~ 57532294 (-)
LOC110530214 LOC106568870 coding downstream 299951 57485241 ~ 57511592 (-)
LOC110530212 rab2a coding downstream 486219 57307415 ~ 57325324 (-)
LOC110530228 LOC106569007 coding upstream 45176 57858233 ~ 57864165 (-)
snorc LOC106568856 coding upstream 53107 57866164 ~ 57876385 (-)
LOC110530229 LOC106568854 coding upstream 63740 57876797 ~ 57910140 (-)
trnaw-cca-3 NA coding upstream 108646 57921703 ~ 57921774 (-)
trnav-aac-153 NA coding upstream 110165 57923222 ~ 57923294 (-)
G726819 NA non-coding downstream 89196 57722108 ~ 57722347 (-)
G726801 NA non-coding downstream 132886 57677860 ~ 57678657 (-)
G726800 NA non-coding downstream 133226 57664324 ~ 57678317 (-)
G726781 NA non-coding downstream 183350 57627977 ~ 57628193 (-)
G726665 NA non-coding downstream 195526 57615634 ~ 57616017 (-)
G726890 NA non-coding upstream 36200 57849257 ~ 57849704 (-)
G726915 NA non-coding upstream 43096 57856153 ~ 57856353 (-)
G726921 NA non-coding upstream 56376 57869433 ~ 57870062 (-)
G726885 NA other downstream 121 57805388 ~ 57811422 (-)
chd7 LOC106599585 other downstream 506017 57224058 ~ 57305576 (-)
G726496 NA other downstream 674430 57136141 ~ 57137113 (-)
penka LOC106569009 other downstream 971417 56828799 ~ 56840147 (-)
G725280 LOC106568997 other downstream 1222272 56588343 ~ 56589271 (-)
G726900 NA other upstream 6990 57820047 ~ 57846689 (-)
G731764 NA other upstream 4231978 62045035 ~ 62048119 (-)
LOC110530961 dhx9 other upstream 4367630 62165849 ~ 62185180 (-)
G735880 NA other upstream 7177244 64990301 ~ 65040241 (-)

Expression


Co-expression Network