Gene
RNA
| Item | Value |
|---|---|
| gene id | trnaw-cca-3 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 57921703 ~ 57921774 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnaw-cca-3 | True | 72 | mRNA | 0.57 | 1 | 57921703 | 57921774 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530229 | LOC106568854 | coding | downstream | 11563 | 57876797 ~ 57910140 (-) |
| snorc | LOC106568856 | coding | downstream | 45318 | 57866164 ~ 57876385 (-) |
| LOC110530228 | LOC106569007 | coding | downstream | 57538 | 57858233 ~ 57864165 (-) |
| lpar5a | LOC106568857 | coding | downstream | 108646 | 57811543 ~ 57813057 (-) |
| LOC110530224 | LOC106568859 | coding | downstream | 117852 | 57801838 ~ 57803851 (-) |
| trnav-aac-153 | NA | coding | upstream | 1448 | 57923222 ~ 57923294 (-) |
| LOC118965534 | NA | coding | upstream | 260858 | 58182632 ~ 58190996 (-) |
| LOC110530234 | NA | coding | upstream | 554698 | 58476472 ~ 58477642 (-) |
| LOC110530949 | LOC106568846 | coding | upstream | 1189349 | 59111123 ~ 59146231 (-) |
| LOC110530239 | LOC106568843 | coding | upstream | 1292620 | 59214394 ~ 59248869 (-) |
| G726921 | NA | non-coding | downstream | 51641 | 57869433 ~ 57870062 (-) |
| G726915 | NA | non-coding | downstream | 65350 | 57856153 ~ 57856353 (-) |
| G726890 | NA | non-coding | downstream | 71999 | 57849257 ~ 57849704 (-) |
| G726967 | NA | non-coding | upstream | 66960 | 57988734 ~ 58054146 (-) |
| G727026 | NA | non-coding | upstream | 213558 | 58135332 ~ 58140314 (-) |
| G727364 | NA | non-coding | upstream | 343164 | 58264938 ~ 58268699 (-) |
| G727514 | NA | non-coding | upstream | 510496 | 58432270 ~ 58433071 (-) |
| G726900 | NA | other | downstream | 75014 | 57820047 ~ 57846689 (-) |
| G726885 | NA | other | downstream | 110281 | 57805388 ~ 57811422 (-) |
| chd7 | LOC106599585 | other | downstream | 616177 | 57224058 ~ 57305576 (-) |
| G726496 | NA | other | downstream | 784590 | 57136141 ~ 57137113 (-) |
| G731764 | NA | other | upstream | 4123261 | 62045035 ~ 62048119 (-) |
| LOC110530961 | dhx9 | other | upstream | 4258913 | 62165849 ~ 62185180 (-) |
| G735880 | NA | other | upstream | 7068527 | 64990301 ~ 65040241 (-) |
| G736216 | NA | other | upstream | 7596393 | 65518167 ~ 65528583 (-) |
| G736841 | LOC106569214 | other | upstream | 8179322 | 66101096 ~ 66101627 (-) |
