LOC110513039 (LOC106568836)


Basic Information

Item Value
gene id LOC110513039
gene name LOC106568836
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 59675762 ~ 59679618 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036985817.1
TTAAAGGATGAGAAAGGGAGGGGTCTGACTGGATGGGTCCTTAAAAAAGGAGAGCAGGAAGCAGTAGAACTCAACTCACAAACAGAGCGCTGACATGACCAGACTACAGGAGACTATCACCATGGCGACGTTGACCCTTCTACTGCTTCTCAGCGCTGCCTTTACACTGGGTGACAGAATGACTTTGAACATAGCAAATGATTTGGTGAGATTTGCAGCAGACCAAAGAAACCCATGCCCCAGAGGCTGGTTCCAATTTAATTCACGCTGCTTCATGTTTGTCAAAACTGCAAGGACATGGCCCAATGCAGAGCGCCACTGTCAGTTACTTGGAGAAAAACTGAAGCCTGTGTACAACACTGTAAAGTACCTTGGCGCAAACCTGGCATCTGTGCACAGCTATGAAGAGTTCCAATTTCTACAGGCGGTGGTGTTGGTCGCGACTGGCAGTTTCCCTCTTACCTGGATTGGTGGATTTGATGCTGTTCAAGCAAAGGTGGAAAAGGACAGGCTATGGTTCTGGAGTGACGGCTCCAAATTTGATCACGAGAGCTAGGCTGAAGGGGAGCCGAATAACCGCAATGGTGCCAGAGAGCCATGTATTCAGATCAACTTTGGCGCTGAAAACGGCTGGAACGATGAATCATGTGGAAAGAGCTATCCCTCCGTGTGCTCCATAAGAACCTGTTTAATCCTTCAAACTGTCAATTGAAACCAAAAATGCTACTCTGGTGTCAGCATCCTAACTGCAAATGTTTCATGTTATAGTGAATTACTTTGAAGGTATTTGTTGCTGTAAAATACGTTTGACTTGTTGTGTAACTATTGTAGCTTGTCAATAAAACTGGTGTACGTATTTAATCTCATGAGTGGTTATTAAACATTGCTTCACTTTGTTTCTTGAA

Function

NR:

description
ladderlectin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036985817.1 True 905 mRNA 0.45 6 59675762 59679618

Neighbor

gene id symbol gene type direction distance location
LOC110530242 LOC106568841 coding downstream 7319 59416408 ~ 59668443 (-)
LOC110530240 LOC106568842 coding downstream 337573 59286655 ~ 59338189 (-)
LOC110530238 LOC106568844 coding downstream 396225 59249702 ~ 59279537 (-)
LOC110530239 LOC106568843 coding downstream 426893 59214394 ~ 59248869 (-)
LOC110530949 LOC106568846 coding downstream 529531 59111123 ~ 59146231 (-)
LOC110530245 LOC106568836 coding upstream 3317 59682935 ~ 59686780 (-)
LOC110518577 LOC106568836 coding upstream 10498 59690116 ~ 59693965 (-)
LOC118965535 LOC106568836 coding upstream 17619 59697237 ~ 59701083 (-)
LOC110530246 LOC106568836 coding upstream 24727 59704345 ~ 59708192 (-)
LOC118965536 LOC106568836 coding upstream 31884 59711502 ~ 59715308 (-)
G728960 NA non-coding downstream 12388 59663172 ~ 59663374 (-)
G728955 NA non-coding downstream 20424 59655113 ~ 59655338 (-)
G728954 NA non-coding downstream 20853 59654683 ~ 59654909 (-)
G728953 NA non-coding downstream 21412 59654106 ~ 59654350 (-)
G728929 NA non-coding downstream 77860 59597694 ~ 59597902 (-)
G728967 NA non-coding upstream 2723 59682341 ~ 59690814 (-)
G728973 NA non-coding upstream 8006 59687624 ~ 59696137 (-)
G728974 NA non-coding upstream 9460 59689078 ~ 59734381 (-)
G728969 NA non-coding upstream 23672 59703290 ~ 59710991 (-)
G728977 NA non-coding upstream 36871 59716489 ~ 59724668 (-)
LOC110530228 LOC106569007 other downstream 1811885 57858233 ~ 57864165 (-)
G726900 NA other downstream 1829073 57820047 ~ 57846689 (-)
G726885 NA other downstream 1864340 57805388 ~ 57811422 (-)
chd7 LOC106599585 other downstream 2370236 57224058 ~ 57305576 (-)
G726496 NA other downstream 2538649 57136141 ~ 57137113 (-)
G731764 NA other upstream 2365417 62045035 ~ 62048119 (-)
LOC110530961 dhx9 other upstream 2501069 62165849 ~ 62185180 (-)
G735880 NA other upstream 5310683 64990301 ~ 65040241 (-)
G736216 NA other upstream 5838549 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 6421478 66101096 ~ 66101627 (-)

Expression


Co-expression Network