LOC118965537 (LOC106568836)


Basic Information

Item Value
gene id LOC118965537
gene name LOC106568836
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 59718618 ~ 59720310 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052927.1
tctgtgtacTGCTTGCTCTAGCGCCACTGTCAGTTACTTGGAGAAAAACTGAAGCCTGTGTACAACACTGTAAAGTACCTTGGCGCAAACCTGGCATCTGTGCACAGCTATGAAGAGTTCCAATTTCTACAGGCGGTGGTGTTGGTCGCGACTGGCAGTTTCCCTCTTACCTGGATTGGTGGATTTGATGCTGTTCAAGCAAAGGTGGAAAAGGACAGGCTATGGTTCTGGAGTGACGGCTCCAAATTTGATCACGAGAGCTGGGCTGAAGGGGAGCCGAATAACCGCAATGGTGCCAGAGAGCCATGTATTCAGATCAACTTTGGCGCTGAAAACGGCTGGAACGATGAATCATGTGGAAAGAGCTATCCCTCCGTGTGCTCCATAAGAACCTGTTTAATCCTTCAAACTGTCAATTGAAACCAAAAATGCTACTCTGGTGTCAGCATCCTAACTGCAAAAGTTTCATGTTATAGTGAATTACTTTGAAGGTATTTGTTGCTGTAAAATACGTTTGACTTGTTGTGTAACTATTGTAGCTTGTCAATAAAACTGGTGTACGTATTTAA

Function

NR:

description
ladderlectin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052927.1 True 569 mRNA 0.44 3 59718618 59720310

Neighbor

gene id symbol gene type direction distance location
LOC118965536 LOC106568836 coding downstream 3310 59711502 ~ 59715308 (-)
LOC110530246 LOC106568836 coding downstream 10426 59704345 ~ 59708192 (-)
LOC118965535 LOC106568836 coding downstream 17535 59697237 ~ 59701083 (-)
LOC110518577 LOC106568836 coding downstream 24653 59690116 ~ 59693965 (-)
LOC110530245 LOC106568836 coding downstream 31838 59682935 ~ 59686780 (-)
LOC110530244 LOC106568836 coding upstream 5115 59725425 ~ 59727118 (-)
LOC110530252 LOC106568833 coding upstream 114502 59834812 ~ 59837439 (-)
LOC110530255 LOC106568830 coding upstream 450427 60170737 ~ 60211903 (-)
LOC110530257 LOC106568828 coding upstream 554978 60275288 ~ 60298094 (-)
gtpbp4 gtpbp4 coding upstream 580847 60301157 ~ 60311600 (-)
G728969 NA non-coding downstream 7627 59703290 ~ 59710991 (-)
G728973 NA non-coding downstream 22481 59687624 ~ 59696137 (-)
G728967 NA non-coding downstream 27804 59682341 ~ 59690814 (-)
G728960 NA non-coding downstream 55244 59663172 ~ 59663374 (-)
G728955 NA non-coding downstream 63280 59655113 ~ 59655338 (-)
G729000 NA non-coding upstream 47369 59767679 ~ 59768045 (-)
G729004 NA non-coding upstream 53534 59773844 ~ 59774151 (-)
G729030 NA non-coding upstream 93408 59813718 ~ 59815563 (-)
G729042 NA non-coding upstream 121295 59841605 ~ 59841979 (-)
LOC110530228 LOC106569007 other downstream 1854741 57858233 ~ 57864165 (-)
G726900 NA other downstream 1871929 57820047 ~ 57846689 (-)
G726885 NA other downstream 1907196 57805388 ~ 57811422 (-)
chd7 LOC106599585 other downstream 2413092 57224058 ~ 57305576 (-)
G726496 NA other downstream 2581505 57136141 ~ 57137113 (-)
G731764 NA other upstream 2324725 62045035 ~ 62048119 (-)
LOC110530961 dhx9 other upstream 2460377 62165849 ~ 62185180 (-)
G735880 NA other upstream 5269991 64990301 ~ 65040241 (-)
G736216 NA other upstream 5797857 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 6380786 66101096 ~ 66101627 (-)

Expression


Co-expression Network