adhfe1 (adhfe1)


Basic Information

Item Value
gene id adhfe1
gene name adhfe1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 61189832 ~ 61200997 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613197.2
GGGCGCTCGTGTATCAGTTCAAACTCCAGACTTCGACTCCCTCGAGTTGAACCCAAAAGCCGAAGGAAGAACTACAACATGGCAGGACGCGACAGGATTGTGCATTTGCTCAGGCAACTTGAAAAAGCAGCGTGCAGATGCCCTGCCCATTCTCATACATTCCATCAAGCTTCAGGACATGACTGTGGAAGAAAAACGGATTATGCATTTGAGATGGCGAGCTCAAACATTAGATATGGAGAGGGTGTCACACGGGAAATTGGTATGGATCTTCAGAACATGGGAGCCCGTAATGTGTGTCTGATGACGGACAATAATCTGTCTCAGCTCTCTCCTGTCGAGGCCGTGTTGGAGTCTCTAGTTCAGAACGGGGTTAACTACAAAGTTTATGACAATGTTCGGGTGGAGCCAACAGACTCCAGCTTCAAGGAGGCCATAGCTTTTGCGAAGAAAGAAACGTTTGACATTTACGTTGCTGTGGGTGGAGGCTCAGTGATTGACACCTGTAAAGCTGCCAACCTGTATGCCTGCCATCCCGATGCGGATTTTCTAGACTTTGTCAATGCGCCTATAGGGAAGGCAAAGCCTATTACAGGTGTTCTCAAGCCCCTGATCGCAGTTCCCACAACAGCAGGAACTGGCAGTGAGACAACAGGTGTTGCGATCTTCGACTTCGAAAAGCTGAAAGCAAaaactgGCATAGCCAGCCGAGCCATTAAGCCGACTCTTGGAATAGTGGATCCTCTCCACACTCTGCATATGCCCGAGAGGGTGGCTGCCAATAGTGGTTTTGATGTGCTATGCCATGCCCTGGAGTCCTACACGGCTCTTCCCTACAACATGCGCAGCCCCTGCCCTCCCAACCCCATCAACCGGCCGGCCTACCAGGGCAGTAACCCCATTAGTGATGTCTGGTCCAGACATGCTCTGAATGTAGTGGCCAAGTACATGAAACGGGCGGTGAACGATGCTGAGGATGTAAAGGCCAGGTCCAGCATGCATCTTGCCAGTGTGTTTGCCGGGATCGGGTTTGGAAATGCTGGGGTCCACTTATGCCACGGTATGTCTTATCCTATTGCTGGAAATGTGAAGACTTACATGGCTAAGGGCTACAATGTGGATCACCCTGTAGTGCCTCATGGTCTGTCTGTGGTTCTgacctctcctgctgtctttgCCTTCACTGCCAGTATGTGTCCAGAGCGCCACCTGGAGGCAGCAGAGATACTTGGGGCTGACGTGAGCAACACCAAGAGGGAGGACGCTGGGCTGCTCCTGGCCGACACCCTGAGACAGTTCCTCTATGACCTGAAGGTAGAGGACGGTCTGAGTGCTGTCGGCTACACCAAGGATGACATACCTGACCTAGTGAGAGGAACAATACCTCAGGAAAGGGTGACCAAGCTGTCTCCTAGGGAACACACAGAGGAAGATTTGACTAATTTGTTTGAGGCCTCCCTGAAGCTGTACTAAGACTGGCTCTCTTATGCGTCATTACCCACTCTCATACTGTACCTGTGTGAGATGATGAGAGCCCAAAGGACTCTGTGCTATTCCCTATACAgcacactacttttaaccaggacccatagggctctggttaaacattgggcactatatagggaatagggtgccatttaaaacGTAGCCTCCCACCGGTTTGCCATCCCATCCTCCTTTTATTGATAGATACAATTAAATTATAAGGTTCCTTATTtgattatacagtatattacccCAATTTCAAATGTTGGTTTTGATTTGTATTTACTACAATATAGTACACCGTTGCTGTCATGTTCCCCTCCCCATTAATTTGAGAATAGACTACTGGTCTGGAGTGGACTACATTGTTATGACAGTGTTGCGTCATTCTTAGAAGTGTACTATTTTTAAAAATCTAGTTTCCAGATTACTCAGGTTAACTGTTATGTAAAGTGTGCCCTAATGCTAAGAAAGTCTGATCTGGCTGCTTTCAAGTAGGTTAACCCAGGAGAGCACACTAGGAGAGCTTTTAAGGTccattgagagaaagagagccaaGTTAAGGTATCAATATGATACAGAATatcagtgcatcccaaatggcatcctattcactTTTGGTCAAAactggtgcactatatagggaatagggtgcaatgaTATCTATCCTTATTAATGATAGATTCTGTATATTGACATGGAAATGGAGTTACGCTAAATCCTCGTTACCGTTAGGTCTTGATGTAAAGCAGGACACAactcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttgcggttttacgctgggtttctgtacagcactttgagatatcagctgatgtacgaagggctatataaatacatttgataactGGATGTCAAAATAAATGCATTTTAGGATCCATAATCATTTATATTCAAAACGTACATGACTCTGATCCCATAAAATCATTAAATCATTTTAGTTTCTGTTTTCTTTGCTTGTCTTGGCAATGTTTCTACTTTTTTCACTCCTGTTCATATGTCACATTTTATTTTTTCTGAATAAGAAAATAAGAATTTCAATAAATGAAGTATTGCGATTTAATTAATGGTAA

Function

symbol description
adhfe1 Predicted to enable alcohol dehydrogenase (NAD+) activity. Predicted to be active in mitochondrion. Is expressed in female organism. Orthologous to human ADHFE1 (alcohol dehydrogenase iron containing 1).

NR:

description
hydroxyacid-oxoacid transhydrogenase, mitochondrial

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0046872 metal ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K11173 ADHFE1; hydroxyacid-oxoacid transhydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613197.2 True 2609 mRNA 0.45 14 61189832 61200997

Neighbor

gene id symbol gene type direction distance location
si:dkey-97a13.12 LOC106569040 coding downstream 183 61184985 ~ 61189649 (-)
LOC110530271 LOC106569036 coding downstream 49206 61118099 ~ 61140626 (-)
LOC110530262 LOC106568824 coding downstream 562356 60600202 ~ 60627476 (-)
gtpbp4 gtpbp4 coding downstream 878232 60301157 ~ 60311600 (-)
LOC118965687 NA coding downstream 882420 60307231 ~ 60307412 (-)
LOC110530276 LOC106569041 coding upstream 20774 61221771 ~ 61233430 (-)
LOC110529124 dnajc5b coding upstream 32876 61233873 ~ 61239771 (-)
LOC110530281 bhlhe22 coding upstream 139005 61340002 ~ 61341211 (-)
LOC110530300 NA coding upstream 803175 62004172 ~ 62033993 (-)
LOC110530302 LOC106569065 coding upstream 848906 62049903 ~ 62064021 (-)
G731295 NA non-coding downstream 16571 61173034 ~ 61173261 (-)
G731292 LOC106569038 non-coding downstream 19406 61170126 ~ 61170426 (-)
G731287 NA non-coding downstream 28960 61157931 ~ 61160872 (-)
G731256 LOC106569033 non-coding downstream 100172 61086151 ~ 61089660 (-)
G731232 NA non-coding downstream 135845 61053782 ~ 61053987 (-)
G731360 NA non-coding upstream 87315 61288312 ~ 61288553 (-)
G731344 NA non-coding upstream 94366 61295363 ~ 61297184 (-)
G731365 NA non-coding upstream 105323 61306320 ~ 61306549 (-)
G731367 NA non-coding upstream 108578 61309575 ~ 61310085 (-)
G731375 NA non-coding upstream 124229 61325226 ~ 61325525 (-)
LOC110530228 LOC106569007 other downstream 3325955 57858233 ~ 57864165 (-)
G726900 NA other downstream 3343143 57820047 ~ 57846689 (-)
G726885 NA other downstream 3378410 57805388 ~ 57811422 (-)
chd7 LOC106599585 other downstream 3884306 57224058 ~ 57305576 (-)
G726496 NA other downstream 4052719 57136141 ~ 57137113 (-)
G731764 NA other upstream 844038 62045035 ~ 62048119 (-)
LOC110530961 dhx9 other upstream 979690 62165849 ~ 62185180 (-)
G735880 NA other upstream 3789304 64990301 ~ 65040241 (-)
G736216 NA other upstream 4317170 65518167 ~ 65528583 (-)
G736841 LOC106569214 other upstream 4900099 66101096 ~ 66101627 (-)

Expression


Co-expression Network